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13_2_20cm_scaffold_5195

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_scaffold_5195_1
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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54..749
DNA (696bp) protein (232aa)
hypothetical protein; K06997 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
hypothetical protein; K06997 id=14625496 bin=bin7_NC10_sister species=Desulfobacca acetoxidans genus=Desulfobacca taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
alanine racemase domain-containing protein
13_2_20cm_scaffold_5195_2
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

746..1567
DNA (822bp) protein (274aa)
proC; pyrroline-5-carboxylate reductase (EC:1.5.1.2); K00286 pyrroline-5-carboxylate reductase [EC:1.5.1.2] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
proC; pyrroline-5-carboxylate reductase (EC:1.5.1.2)
Pyrroline-5-carboxylate reductase id=4599706 bin=GWC2_Methylomirabilis_70_16 species=Flexistipes sinusarabici genus=Flexistipes taxon_order=Deferribacterales taxon_class=Deferribacteres phylum=Deferribacteres tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
13_2_20cm_scaffold_5195_3
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

1572..1877
DNA (306bp) protein (102aa)
hypothetical protein; K02221 YggT family protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Uncharacterized protein id=1871976 bin=GWB2_Proteobacteria_55_19 species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Proteobacteria_55_19 organism_group=Proteobacteria organism_desc=Good
hypothetical protein
13_2_20cm_scaffold_5195_4
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

1894..2367
DNA (474bp) protein (158aa)
hypothetical protein; K04074 cell division initiation protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
cell-division initiation protein; K04074 cell division initiation protein id=14625493 bin=bin7_NC10_sister species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=bin7_NC10_sister organism_group=NC10
cell division protein DivIVA
13_2_20cm_scaffold_5195_5
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

2339..2626
DNA (288bp) protein (96aa)
hypothetical protein; K09131 hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Uncharacterized protein id=4599709 bin=GWC2_Methylomirabilis_70_16 species=Isosphaera pallida genus=Isosphaera taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hypothetical protein
13_2_20cm_scaffold_5195_6
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

2623..3663
DNA (1041bp) protein (347aa)
methylthioribose-1-phosphate isomerase (EC:5.3.1.23); K08963 methylthioribose-1-phosphate isomerase [EC:5.3.1.23] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
methylthioribose-1-phosphate isomerase (EC:5.3.1.23)
Methylthioribose-1-phosphate isomerase id=3779777 bin=GWA2_Methylomirabilis_73_35 species=Thermaerobacter marianensis genus=Thermaerobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis rbh
13_2_20cm_scaffold_5195_7
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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3707..5293
DNA (1587bp) protein (529aa)
SagB-type dehydrogenase domain protein id=3779776 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Haloterrigena taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
SagB-type dehydrogenase domain-containing protein Tax=GWA2_Rokubacteria_73_35_curated
hypothetical protein
13_2_20cm_scaffold_5195_8
R_Rokubacteria_69_13, Rokubacteria, Bacteria

Not on your lists

comp(5247..5504)
DNA (258bp) protein (86aa)
Tax=RIFCSPHIGHO2_02_FULL_Rokubacteria_69_13_curated
13_2_20cm_scaffold_5195_9
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

5582..6370
DNA (789bp) protein (263aa)
sga; Serine-glyoxylate aminotransferase (EC:2.6.1.45) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
sga; Serine-glyoxylate aminotransferase (EC:2.6.1.45)
Serine-glyoxylate aminotransferase id=3779775 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_2_20cm_scaffold_5195_10
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

6367..7950
DNA (1584bp) protein (528aa)
serA; D-3-phosphoglycerate dehydrogenase (EC:1.1.1.95) id=14625486 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
serA; D-3-phosphoglycerate dehydrogenase (EC:1.1.1.95) Tax=CSP1_6_Rokubacteria
serA; D-3-phosphoglycerate dehydrogenase (EC:1.1.1.95)
13_2_20cm_scaffold_5195_11
unknown

Not on your lists

comp(7940..8458)
DNA (519bp) protein (173aa)

This feature has no annotations

13_2_20cm_scaffold_5195_12
unknown

Not on your lists

comp(8464..8886)
DNA (423bp) protein (141aa)

This feature has no annotations

13_2_20cm_scaffold_5195_13
unknown

Not on your lists

9063..9188
DNA (126bp) protein (42aa)

This feature has no annotations

13_2_20cm_scaffold_5195_14
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

9185..10609
DNA (1425bp) protein (475aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
TPR repeat-containing adenylate/guanylate cyclase id=14625908 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
two-component, sigma-54 specific, transcriptional regulator, Fis family
13_2_20cm_scaffold_5195_15
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

10606..13203
DNA (2598bp) protein (866aa)
TPR repeat-containing adenylate/guanylate cyclase Tax=CSP1_6_Rokubacteria
TPR repeat-containing adenylate/guanylate cyclase id=14625908 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
adenylate/guanylate cyclase
13_2_20cm_scaffold_5195_16
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

13237..13860
DNA (624bp) protein (208aa)
phosphoglycerate mutase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
Phosphoglycerate mutase id=3779774 bin=GWA2_Methylomirabilis_73_35 species=Thermacetogenium phaeum genus=Thermacetogenium taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
phosphoglycerate mutase
13_2_20cm_scaffold_5195_17
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

13922..15175
DNA (1254bp) protein (418aa)
hisZ; ATP phosphoribosyltransferase regulatory subunit Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
hisZ; ATP phosphoribosyltransferase regulatory subunit id=14625485 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
hisZ; ATP phosphoribosyltransferase regulatory subunit
13_2_20cm_scaffold_5195_18
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

15160..16485
DNA (1326bp) protein (442aa)
adenylosuccinate synthase; K01939 adenylosuccinate synthase [EC:6.3.4.4] Tax=GWA2_Rokubacteria_73_35_curated
adenylosuccinate synthetase (EC:6.3.4.4)
Adenylosuccinate synthetase id=3779771 bin=GWA2_Methylomirabilis_73_35 species=Leptospirillum ferrooxidans genus=Leptospirillum taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_2_20cm_scaffold_5195_19
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(17483..17716)
DNA (234bp) protein (78aa)
Two component, sigma54 specific, transcriptional regulator, Fis family id=4020045 bin=GWA2_Methylomirabilis_73_35 species=Streptomyces himastatinicus genus=Streptomyces taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Fis family transcriptional regulator Tax=GWA2_Rokubacteria_73_35_curated
Displaying 19 items

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