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13_2_20cm_scaffold_240

Search features with annotation key words

Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_scaffold_240_1
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(3..242)
DNA (240bp) protein (80aa)
Serine protease Do id=3708848 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Dictyoglomus taxon_order=Dictyoglomales taxon_class=Dictyoglomia phylum=Dictyoglomi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
serine protease Do Tax=GWA2_Rokubacteria_73_35_curated
13_2_20cm_scaffold_240_2
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

314..1618
DNA (1305bp) protein (435aa)
Zn-dependent protease Tax=GWA2_Rokubacteria_73_35_curated
Putative Zn-dependent protease, involved in pqq synthesis (PpqF) id=4954832 bin=GWC2_Methylomirabilis_70_24 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
Zn-dependent protease
13_2_20cm_scaffold_240_3
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

1615..2604
DNA (990bp) protein (330aa)
secretion protein HlyD; K01993 HlyD family secretion protein id=14625064 bin=bin7_NC10_sister species=Moorella thermoacetica genus=Moorella taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=bin7_NC10_sister organism_group=NC10 rbh
secretion protein HlyD; K01993 HlyD family secretion protein Tax=CSP1_6_Rokubacteria
Secretion protein HlyD
13_2_20cm_scaffold_240_4
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2652..3134
DNA (483bp) protein (161aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. STM 3843 RepID=H0TFX4_9BRAD
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
hypothetical protein
13_2_20cm_scaffold_240_5
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

3074..4102
DNA (1029bp) protein (343aa)
ABC transporter ATP-binding protein (EC:3.6.3.-) Tax=GWA2_Rokubacteria_73_35_curated
ABC transporter ATP-binding protein (EC:3.6.3.-)
Putative ABC transporter (ATP-binding protein) id=3708845 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_2_20cm_scaffold_240_6
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

4217..5341
DNA (1125bp) protein (375aa)
Putative ABC transporter (Permease proteine) id=3708844 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
ABC transporter permease Tax=GWA2_Rokubacteria_73_35_curated
ABC transporter permease
13_2_20cm_scaffold_240_7
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5347..5565
DNA (219bp) protein (73aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CU58_PSEUX
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
hypothetical protein
13_2_20cm_scaffold_240_8
R_Elusimicrobia_60_11, Elusimicrobia, Bacteria

Not on your lists

5562..5960
DNA (399bp) protein (133aa)
Uncharacterized protein n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MLS6_9BACT
hypothetical protein Tax=RIFCSPLOWO2_01_FULL_Elusimicrobia_60_11_curated
hypothetical protein
13_2_20cm_scaffold_240_9
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

5957..7255
DNA (1299bp) protein (433aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Putative Peptidase M16 domain protein, involved in ppq synthesis (PpqG) id=3708843 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
13_2_20cm_scaffold_240_10
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

7252..7827
DNA (576bp) protein (192aa)
id=14625060 Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
id=4954793 bin=GWC2_Methylomirabilis_70_24 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
13_2_20cm_scaffold_240_11
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

7846..8736
DNA (891bp) protein (297aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Putative uncharacterized protein id=4380018 bin=GWA2_Methylomirabilis_73_35 species=Thermobaculum terrenum genus=Thermobaculum taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
13_2_20cm_scaffold_240_12
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

8779..9747
DNA (969bp) protein (323aa)
qor2; NADPH:quinone reductase (EC:1.6.5.5); K00344 NADPH2:quinone reductase [EC:1.6.5.5] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Quinone oxidoreductase (NADPH:quinone reductase) id=4380010 bin=GWA2_Methylomirabilis_73_35 species=Sorangium cellulosum genus=Sorangium taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Alcohol dehydrogenase zinc-binding domain protein
13_2_20cm_scaffold_240_13
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

9918..10835
DNA (918bp) protein (306aa)
Import inner membrane translocase subunit Tim44 id=4957118 bin=GWA2_Methylomirabilis_73_35 species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
import inner membrane translocase subunit Tim44 Tax=GWA2_Rokubacteria_73_35_curated
import inner membrane translocase subunit Tim44
13_2_20cm_scaffold_240_14
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

10864..12489
DNA (1626bp) protein (542aa)
AsmA family protein; K07289 AsmA protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
AsmA family protein id=4379996 bin=GWA2_Methylomirabilis_73_35 species=mine drainage metagenome genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
AsmA family protein
13_2_20cm_scaffold_240_15
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(12473..13294)
DNA (822bp) protein (274aa)
Methylase involved in ubiquinone/menaquinone biosynthesis id=4379994 bin=GWA2_Methylomirabilis_73_35 species=Burkholderiales bacterium JOSHI_001 genus=unknown taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
UbiE/COQ5 family methlytransferase Tax=GWA2_Rokubacteria_73_35_curated
UbiE/COQ5 family methlytransferase
13_2_20cm_scaffold_240_16
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

13380..14510
DNA (1131bp) protein (377aa)
citrate synthase (EC:2.3.3.1); K01647 citrate synthase [EC:2.3.3.1] id=14625051 bin=bin7_NC10_sister species=Thermaerobacter marianensis genus=Thermaerobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=bin7_NC10_sister organism_group=NC10
citrate synthase (EC:2.3.3.1); K01647 citrate synthase [EC:2.3.3.1] Tax=CSP1_6_Rokubacteria
2-methylcitrate synthase/citrate synthase II (EC:2.3.3.1)
13_2_20cm_scaffold_240_17
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

14523..15764
DNA (1242bp) protein (414aa)
Oxidoreductase domain protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Oxidoreductase domain protein id=3024538 bin=GWC2_Methylomirabilis_70_16 species=Tepidanaerobacter acetatoxydans genus=Tepidanaerobacter taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
oxidoreductase domain-containing protein
13_2_20cm_scaffold_240_18
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

15761..16639
DNA (879bp) protein (293aa)
dapF; diaminopimelate epimerase (EC:5.1.1.7); K01778 diaminopimelate epimerase [EC:5.1.1.7] Tax=GWC2_Rokubacteria_70_16_curated
Diaminopimelate epimerase (EC:5.1.1.7)
Diaminopimelate epimerase id=3024534 bin=GWC2_Methylomirabilis_70_16 species=Persephonella marina genus=Persephonella taxon_order=Aquificales taxon_class=Aquificae phylum=Aquificae tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
13_2_20cm_scaffold_240_19
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

16636..17220
DNA (585bp) protein (195aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Putative uncharacterized protein id=3024532 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
DprA/Smf-like protein
13_2_20cm_scaffold_240_20
Natronorubrum tibetense, Natronorubrum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(17207..17929)
DNA (723bp) protein (241aa)
5-formyltetrahydrofolate cyclo-ligase n=1 Tax=Haloterrigena limicola JCM 13563 RepID=M0CS69_9EURY
5-formyltetrahydrofolate cyclo-ligase {ECO:0000313|EMBL:ELY42918.1}; TaxID=1114856 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronorubrum.;" source="Natronorubrum ti
5-formyltetrahydrofolate cyclo-ligase
13_2_20cm_scaffold_240_21
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

17966..19018
DNA (1053bp) protein (351aa)
Aminoglycoside phosphotransferase id=4923991 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=Ralstonia taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
aminoglycoside phosphotransferase; K06979 Tax=GWC2_Rokubacteria_70_16_curated
fadE36; aminoglycoside phosphotransferase
13_2_20cm_scaffold_240_22
unknown

Not on your lists

comp(19015..19323)
DNA (309bp) protein (103aa)

This feature has no annotations

Displaying 22 items

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