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13_1_40cm_scaffold_16450

Search features with annotation key words

Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_16450_1
unknown

Not on your lists

3..785
DNA (783bp) protein (261aa)

This feature has no annotations

13_1_40cm_scaffold_16450_2
unknown

Not on your lists

comp(637..1482)
DNA (846bp) protein (282aa)

This feature has no annotations

13_1_40cm_scaffold_16450_3
unknown

Not on your lists

comp(1552..1926)
DNA (375bp) protein (125aa)

This feature has no annotations

13_1_40cm_scaffold_16450_4
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

2169..3182
DNA (1014bp) protein (338aa)
MoxR-like ATPases (EC:3.6.3.-) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
MoxR-like ATPases (EC:3.6.3.-) id=14626575 bin=bin7_NC10_sister species=Pedosphaera parvula genus=Pedosphaera taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=bin7_NC10_sister organism_group=NC10
MoxR-like ATPase
13_1_40cm_scaffold_16450_5
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

3198..4826
DNA (1629bp) protein (543aa)
id=3287913 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
id=3287913 bin=GWF2_Methylomirabilis_70_14 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_scaffold_16450_6
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

4873..5475
DNA (603bp) protein (201aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
Putative uncharacterized protein id=3887908 bin=GWC2_Methylomirabilis_70_24 species=unknown genus=Roseiflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
hypothetical protein
13_1_40cm_scaffold_16450_7
unknown

Not on your lists

comp(5334..6035)
DNA (702bp) protein (234aa)

This feature has no annotations

13_1_40cm_scaffold_16450_8
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

6291..9692
DNA (3402bp) protein (1134aa)
chloride channel Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
chloride channel id=14625357 bin=bin7_NC10_sister species=Syntrophomonas wolfei genus=Syntrophomonas taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=bin7_NC10_sister organism_group=NC10
chloride channel
13_1_40cm_scaffold_16450_9
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

9692..11125
DNA (1434bp) protein (478aa)
peptidase S1 and S6 chymotrypsin/Hap; K12600 superkiller protein 3 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
hypothetical protein id=14625358 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Cyanobacteria tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
13_1_40cm_scaffold_16450_10
unknown

Not on your lists

comp(11221..12099)
DNA (879bp) protein (293aa)

This feature has no annotations

13_1_40cm_scaffold_16450_11
Halomicrobium katesii, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

12744..13178
DNA (435bp) protein (145aa)
hypothetical protein n=1 Tax=Halomicrobium katesii RepID=UPI000372EC0A
13_1_40cm_scaffold_16450_12
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

13768..14001
DNA (234bp) protein (78aa)
AsnC family transcriptional regulator Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
Transcriptional regulator id=3714115 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_scaffold_16450_13
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

14015..15241
DNA (1227bp) protein (409aa)
iscS; cysteine desulfurase (EC:2.8.1.7); K04487 cysteine desulfurase [EC:2.8.1.7] Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
iscS; cysteine desulfurase (EC:2.8.1.7)
Cysteine desulfurase id=3714107 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_scaffold_16450_14
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

15255..15668
DNA (414bp) protein (138aa)
nitrogen fixation protein, NifU-like protein; K04488 nitrogen fixation protein NifU and related proteins Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
iscU; iron-sulfur cluster assembly protein IscU; K04488 nitrogen fixation protein NifU and related proteins id=14625363 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=bin7_NC10_sister organism_group=NC10
scaffold protein
13_1_40cm_scaffold_16450_15
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

15690..16019
DNA (330bp) protein (110aa)
iscA; iron-sulfur cluster assembly protein IscA; K13628 iron-sulfur cluster assembly protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Iron-sulfur cluster assembly protein IscA id=3714096 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
iscA; iron-sulfur cluster assembly protein IscA
13_1_40cm_scaffold_16450_16
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

16103..16693
DNA (591bp) protein (197aa)
hscB; co-chaperone protein HscB; K04082 molecular chaperone HscB Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Co-chaperone protein HscB (Hsc20) id=3714094 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hscB; co-chaperone protein HscB
13_1_40cm_scaffold_16450_17
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

16671..17003
DNA (333bp) protein (111aa)
hscA; chaperone protein HscA; K04043 molecular chaperone DnaK Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
hscA; chaperone protein HscA; K04043 molecular chaperone DnaK id=14625366 bin=bin7_NC10_sister species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=bin7_NC10_sister organism_group=NC10
hscA; chaperone protein HscA
Displaying 17 items

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