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13_1_40cm_scaffold_25313

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_25313_1
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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2..193
DNA (192bp) protein (64aa)
aminopeptidase (EC:3.4.13.9)
Putative aminopeptidase; putative Proline or Methionine dipeptidase id=4213640 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Bradyrhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
peptidase M24 Tax=GWA2_Rokubacteria_73_35_curated
13_1_40cm_scaffold_25313_2
R_Rokubacteria_68_19, Rokubacteria, Bacteria

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196..1428
DNA (1233bp) protein (411aa)
Extracellular ligand-binding receptor Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
Extracellular ligand-binding receptor id=4827657 bin=GWA2_Methylomirabilis_73_35 species=beta proteobacterium CB genus=unknown taxon_order=unknown taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Extracellular ligand-binding receptor
13_1_40cm_scaffold_25313_3
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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comp(1441..1746)
DNA (306bp) protein (102aa)
N-acetyltransferase GCN5; K03823 phosphinothricin acetyltransferase [EC:2.3.1.183] Tax=GWA2_Rokubacteria_73_35_curated
Transcriptional regulator, ArsR family id=4213638 bin=GWA2_Methylomirabilis_73_35 species=Ktedonobacter racemifer genus=Ktedonobacter taxon_order=Ktedonobacterales taxon_class=Ktedonobacteria phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
N-acetyltransferase GCN5
13_1_40cm_scaffold_25313_4
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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comp(2136..2990)
DNA (855bp) protein (285aa)
NAD-dependent epimerase/dehydratase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
NAD-dependent epimerase/dehydratase id=4669071 bin=GWF2_Methylomirabilis_70_14 species=Isosphaera pallida genus=Isosphaera taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
NAD-dependent epimerase/dehydratase
13_1_40cm_scaffold_25313_5
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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3503..4159
DNA (657bp) protein (219aa)
putative methyltransferase type 11 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Methyltransferase id=4213634 bin=GWA2_Methylomirabilis_73_35 species=uncultured candidate division OP1 bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
putative methyltransferase
13_1_40cm_scaffold_25313_6
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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4194..5183
DNA (990bp) protein (330aa)
D-3-phosphoglycerate dehydrogenase (EC:1.1.1.95); K00058 D-3-phosphoglycerate dehydrogenase [EC:1.1.1.95] Tax=GWA2_Rokubacteria_73_35_curated
D-3-phosphoglycerate dehydrogenase (EC:1.1.1.95)
D-3-phosphoglycerate dehydrogenase id=4213632 bin=GWA2_Methylomirabilis_73_35 species=Thermaerobacter subterraneus genus=Thermaerobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_scaffold_25313_7
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

5193..5981
DNA (789bp) protein (263aa)
Uncharacterized protein id=4213630 bin=GWA2_Methylomirabilis_73_35 species=Thermaerobacter subterraneus genus=Thermaerobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein Tax=GWA2_Rokubacteria_73_35_curated
hypothetical protein
13_1_40cm_scaffold_25313_8
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

5978..6652
DNA (675bp) protein (225aa)
TIGR00370 family protein id=4213628 bin=GWA2_Methylomirabilis_73_35 species=Thermaerobacter subterraneus genus=Thermaerobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
putative regulatory protein Tax=GWA2_Rokubacteria_73_35_curated
putative regulatory protein
Displaying 8 items

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