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13_1_40cm_scaffold_202

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Displaying items 1-30 of 38 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_202_1
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(1..537)
DNA (537bp) protein (179aa)
Uncharacterized protein id=2558561 bin=GWA2_Methylomirabilis_73_35 species=Hydrocarboniphaga effusa genus=Hydrocarboniphaga taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein Tax=GWA2_Rokubacteria_73_35_curated
hypothetical protein
13_1_40cm_scaffold_202_2
CSP1_5_NC10, NC10, Bacteria

Not on your lists

832..1176
DNA (345bp) protein (115aa)
hypothetical protein id=14430759 bin=bin3_NC10 species=16ft_combo_ws3 genus=16ft_combo_ws3 taxon_order=16ft_combo_ws3 taxon_class=16ft_combo_ws3 phylum=WS3 tax=bin3_NC10 organism_group=NC10
hypothetical protein Tax=CSP1_5_NC10
hypothetical protein
13_1_40cm_scaffold_202_3
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

1185..2015
DNA (831bp) protein (277aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Putative uncharacterized protein id=2558357 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Janthinobacterium taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
13_1_40cm_scaffold_202_4
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

2071..4641
DNA (2571bp) protein (857aa)
putative peptidase M1, membrane alanine aminopeptidase (EC:3.4.11.2) Tax=GWA2_Rokubacteria_73_35_curated
putative peptidase M1, membrane alanine aminopeptidase (EC:3.4.11.2)
Putative Peptidase M1, membrane alanine aminopeptidase id=4217952 bin=GWC2_Methylomirabilis_70_16 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
13_1_40cm_scaffold_202_5
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

4694..6664
DNA (1971bp) protein (657aa)
peptidase S1 and S6, chymotrypsin/Hap Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Peptidase S1 and S6, chymotrypsin/Hap id=3870880 bin=GWA2_Methylomirabilis_73_35 species=Paenibacillus mucilaginosus genus=Paenibacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
peptidase S46
13_1_40cm_scaffold_202_6
unknown

Not on your lists

6715..6816
DNA (102bp) protein (34aa)

This feature has no annotations

13_1_40cm_scaffold_202_7
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

6803..7249
DNA (447bp) protein (149aa)
deoxyuridine 5'-triphosphate nucleotidohydrolase (EC:3.6.1.23); K01520 dUTP pyrophosphatase [EC:3.6.1.23] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
deoxyuridine 5'-triphosphate nucleotidohydrolase (EC:3.6.1.23)
Deoxyuridine 5'-triphosphate nucleotidohydrolase id=3870909 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Frankia taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_scaffold_202_8
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(7246..7452)
DNA (207bp) protein (69aa)
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
13_1_40cm_scaffold_202_9

Not on your lists

7563..8102
DNA (540bp) protein (180aa)
Uncharacterized protein n=1 Tax=Streptomyces davawensis JCM 4913 RepID=K4RDT5_9ACTO
Marine sediment metagenome DNA, contig: S01H1_C00258 {ECO:0000313|EMBL:GAF74512.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
hypothetical protein
13_1_40cm_scaffold_202_10
unknown

Not on your lists

comp(8099..8809)
DNA (711bp) protein (237aa)

This feature has no annotations

13_1_40cm_scaffold_202_trna_2
unknown

Not on your lists

comp(8908..8982)
DNA (75bp)
transferRNA
13_1_40cm_scaffold_202_11
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

9081..9899
DNA (819bp) protein (273aa)
Oxidoreductase, short-chain dehydrogenase/reductase family id=4994654 bin=GWA2_Methylomirabilis_73_35 species=Sorangium cellulosum genus=Sorangium taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein Tax=GWA2_Rokubacteria_73_35_curated
short chain dehydrogenase/reductase family oxidoreductase
13_1_40cm_scaffold_202_12
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(9942..11528)
DNA (1587bp) protein (529aa)
Exported protein id=3824568 bin=GWC2_Methylomirabilis_70_16 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hypothetical protein Tax=GWC2_Rokubacteria_70_16_curated
hypothetical protein
13_1_40cm_scaffold_202_13
RBG_19FT_COMBO_Nitrospirae_58_9_curated, Nitrospirae, Bacteria

Not on your lists

comp(11679..12233)
DNA (555bp) protein (185aa)
Osmotically-inducible protein Y n=1 Tax=Erwinia piriflorinigrans CFBP 5888 RepID=V5ZAU9_9ENTR
osmY; OsmY; K04065 hyperosmotically inducible periplasmic protein Tax=RBG_19FT_COMBO_Nitrospirae_58_9_curated
osmY; osmotically inducible protein Y precursor OsmY
13_1_40cm_scaffold_202_14
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(12382..12756)
DNA (375bp) protein (125aa)
multi-sensor hybrid histidine kinase (EC:2.7.13.3) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Multi-sensor hybrid histidine kinase id=4699813 bin=GWA2_Methylomirabilis_73_35 species=Beijerinckia indica genus=Beijerinckia taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
putative ATPase
13_1_40cm_scaffold_202_trna_1
unknown

Not on your lists

comp(13127..13199)
DNA (73bp)
transferRNA
13_1_40cm_scaffold_202_15
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(13396..15213)
DNA (1818bp) protein (606aa)
aldehyde ferredoxin oxidoreductase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Aldehyde ferredoxin oxidoreductase id=3789300 bin=GWA2_Methylomirabilis_73_35 species=halophilic archaeon DL31 genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
13_1_40cm_scaffold_202_16
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(15245..18229)
DNA (2985bp) protein (995aa)
nrfG; hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Lytic transglycosylase id=3789302 bin=GWA2_Methylomirabilis_73_35 species=Danio rerio genus=Danio taxon_order=Cypriniformes taxon_class=Actinopterygii phylum=Chordata tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
outer membrane assembly lipoprotein YfiO
13_1_40cm_scaffold_202_17
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(18226..19608)
DNA (1383bp) protein (461aa)
Outer membrane assembly lipoprotein YfiO id=3789304 bin=GWA2_Methylomirabilis_73_35 species=Rhodothermus marinus genus=Rhodothermus taxon_order=Bacteroidetes Order II. Incertae sedis taxon_class=unknown phylum=Bacteroidetes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
outer membrane assembly lipoprotein YfiO Tax=GWA2_Rokubacteria_73_35_curated
outer membrane assembly lipoprotein YfiO
13_1_40cm_scaffold_202_18
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

19649..20299
DNA (651bp) protein (217aa)
cbbZ; phosphoglycolate phosphatase (EC:3.1.3.18)
phosphatase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
HAD-superfamily hydrolase, subfamily IA, variant 3 id=3789308 bin=GWA2_Methylomirabilis_73_35 species=Thermobacillus composti genus=Thermobacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_scaffold_202_19
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

20302..21660
DNA (1359bp) protein (453aa)
rarA; polynucleotide enzyme with nucleotide triphosphate hydrolase domain Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Putative polynucleotide enzyme with nucleotide triphosphate hydrolase domain id=4329549 bin=GWC2_Methylomirabilis_70_16 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
rarA; polynucleotide enzyme with nucleotide triphosphate hydrolase domain
13_1_40cm_scaffold_202_20
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

21680..22114
DNA (435bp) protein (145aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
hypothetical protein id=3979826 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_scaffold_202_21
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

22152..23282
DNA (1131bp) protein (377aa)
D-alanine--D-alanine ligase (EC:6.3.2.4); K01921 D-alanine-D-alanine ligase [EC:6.3.2.4] Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
D-alanine--D-alanine ligase (EC:6.3.2.4); K01921 D-alanine-D-alanine ligase [EC:6.3.2.4] id=14626264 bin=bin7_NC10_sister species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=bin7_NC10_sister organism_group=NC10
D-alanine--D-alanine ligase (EC:6.3.2.4)
13_1_40cm_scaffold_202_22
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

23279..24379
DNA (1101bp) protein (367aa)
UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-UDP N-acetylglucosamine transferase (EC:2.4.1.227); K02563 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl
UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-UDP N-acetylglucosamine transferase (EC:2.4.1.227)
UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase id=3979811 bin=GWA2_Methylomirabilis_73_35 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_scaffold_202_23
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(24587..25246)
DNA (660bp) protein (220aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Uncharacterized protein id=3979808 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
13_1_40cm_scaffold_202_24
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

25308..26276
DNA (969bp) protein (323aa)
Extracellular solute-binding protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
ssuA; sulfonate/nitrate/taurine transport system substrate-binding protein id=14626267 bin=bin7_NC10_sister species=Burkholderia sp. WSM4176 genus=Burkholderia taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
ABC transporter substrate-binding protein
13_1_40cm_scaffold_202_25
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(26245..26856)
DNA (612bp) protein (204aa)
maf protein; K06287 septum formation protein Tax=GWA2_Rokubacteria_73_35_curated
MAF protein id=3979804 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Brevibacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
maf protein
13_1_40cm_scaffold_202_26
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(27035..27301)
DNA (267bp) protein (89aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Uncharacterized protein id=3979802 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=TA06 tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
13_1_40cm_scaffold_202_27
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(27312..28232)
DNA (921bp) protein (307aa)
speE; Spermidine synthase (Putrescine aminopropyltransferase) (PAPT) (SPDSY) (EC:2.5.1.16) Tax=GWA2_Rokubacteria_73_35_curated
speE; Spermidine synthase (Putrescine aminopropyltransferase) (PAPT) (SPDSY) (EC:2.5.1.16) id=14626269 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
speE; Spermidine synthase (Putrescine aminopropyltransferase) (PAPT) (SPDSY) (EC:2.5.1.16)
13_1_40cm_scaffold_202_28
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(28229..28624)
DNA (396bp) protein (132aa)
S-adenosylmethionine decarboxylase (EC:4.1.1.50)
S-adenosylmethionine decarboxylase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
S-adenosylmethionine decarboxylase proenzyme id=3979797 bin=GWA2_Methylomirabilis_73_35 species=Leptospirillum ferrooxidans genus=Leptospirillum taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Displaying items 1-30 of 38 in total

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