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13_1_40cm_scaffold_4556

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_4556_1
R_Rokubacteria_71_18, Rokubacteria, Bacteria

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comp(3..266)
DNA (264bp) protein (88aa)
malate/L-lactate dehydrogenase; K13574 uncharacterized oxidoreductase [EC:1.1.1.-] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
Malate/L-lactate dehydrogenase n=1 Tax=Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 / NBRC 12443 / NCIB 9113) RepID=D7A124_STAND
malate/L-lactate dehydrogenase
13_1_40cm_scaffold_4556_2
RBG_16_Deltaproteobacteria_48_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(275..754)
DNA (480bp) protein (160aa)
YbaK/prolyl-tRNA synthetase associated region n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6U7N1_9CHLR id=1244459 bin=RBG9 species=Ktedonobacter racemifer genus=Ktedonobacter taxon_order=Ktedonobacterales taxon_class=Ktedonobacteria phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
hypothetical protein Tax=RBG_16_Deltaproteobacteria_48_10_curated
hypothetical protein
13_1_40cm_scaffold_4556_3
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

777..1367
DNA (591bp) protein (197aa)
Uncharacterized protein n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MJ37_RHOM4
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
hypothetical protein
13_1_40cm_scaffold_4556_4
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(1292..2689)
DNA (1398bp) protein (466aa)
protoporphyrinogen oxidase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Protoporphyrinogen oxidase id=4998220 bin=GWA2_Methylomirabilis_73_35 species=Singulisphaera acidiphila genus=Singulisphaera taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
protoporphyrinogen oxidase
13_1_40cm_scaffold_4556_5
unknown

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3217..3411
DNA (195bp) protein (65aa)

This feature has no annotations

13_1_40cm_scaffold_4556_6
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(3613..4539)
DNA (927bp) protein (309aa)
Uroporphyrinogen III synthase, uroporhyrinogen decarboxylase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Uroporphyrinogen decarboxylase id=4216374 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Uroporphyrinogen III synthase, uroporhyrinogen decarboxylase
13_1_40cm_scaffold_4556_7
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

4715..6385
DNA (1671bp) protein (557aa)
hypothetical protein; K01576 benzoylformate decarboxylase [EC:4.1.1.7] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Thiamine pyrophosphate-dependent enzyme, possible carboligase or decarboxylase id=3713089 bin=GWF2_Methylomirabilis_70_14 species=unknown genus=Bradyrhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
13_1_40cm_scaffold_4556_8
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

6442..7572
DNA (1131bp) protein (377aa)
citrate synthase (EC:2.3.3.1); K01647 citrate synthase [EC:2.3.3.1] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
citrate synthase (EC:2.3.3.1)
Citrate synthase id=3963832 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Thermaerobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_scaffold_4556_9
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

7694..9613
DNA (1920bp) protein (640aa)
aconitate hydratase (EC:4.2.1.3); K01681 aconitate hydratase 1 [EC:4.2.1.3] Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
aconitate hydratase (EC:4.2.1.3)
Aconitate hydratase id=3841313 bin=GWF2_Methylomirabilis_70_14 species=Gloeobacter violaceus genus=Gloeobacter taxon_order=Gloeobacterales taxon_class=Gloeobacteria phylum=Cyanobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_scaffold_4556_10
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

9610..10095
DNA (486bp) protein (162aa)
PrpF family protein; K09788 hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
AcnD-accessory protein PrpF id=3841322 bin=GWF2_Methylomirabilis_70_14 species=uncultured prokaryote genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
Displaying 10 items

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