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13_1_40cm_scaffold_48

Search features with annotation key words

Displaying items 1-30 of 37 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_48_1
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

Not on your lists

comp(460..660)
DNA (201bp) protein (67aa)
Putative recombinase n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MH74_9BACT
recombinase
Putative recombinase {ECO:0000313|EMBL:CBE69106.1}; TaxID=671143 species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
13_1_40cm_scaffold_48_2
unknown

Not on your lists

comp(888..1082)
DNA (195bp) protein (65aa)

This feature has no annotations

13_1_40cm_scaffold_48_3
unknown

Not on your lists

comp(1180..1728)
DNA (549bp) protein (183aa)

This feature has no annotations

13_1_40cm_scaffold_48_4
unknown

Not on your lists

2230..2475
DNA (246bp) protein (82aa)

This feature has no annotations

13_1_40cm_scaffold_48_5
Chroococcidiopsis thermalis, Chroococcidiopsis, Pleurocapsales, Cyanobacteria, Bacteria

Not on your lists

comp(2551..2961)
DNA (411bp) protein (137aa)
Uncharacterized protein n=1 Tax=Chroococcidiopsis thermalis PCC 7203 RepID=K9U0R0_9CYAN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFY88682.1}; TaxID=251229 species="Bacteria; Cyanobacteria; Pleurocapsales; Chroococcidiopsis.;" source="Chroococcidiopsis thermalis PCC 7203.;"
13_1_40cm_scaffold_48_6
Bacillus amyloliquefaciens, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(2958..3431)
DNA (474bp) protein (158aa)
Putative doxX family protein n=1 Tax=Bacillus amyloliquefaciens subsp. plantarum UCMB5113 RepID=S6FP82_BACAM
Putative doxX family protein
Putative doxX family protein {ECO:0000313|EMBL:CDG28463.1}; TaxID=1338518 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus amyloliquefaciens subsp. plantar
13_1_40cm_scaffold_48_7
unknown

Not on your lists

comp(3428..3733)
DNA (306bp) protein (102aa)

This feature has no annotations

13_1_40cm_scaffold_48_8
BJP_IG2102_Syntrophobacterales_60_12, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3785..4381)
DNA (597bp) protein (199aa)
hypothetical protein n=1 Tax=Actinomadura flavalba RepID=UPI00035D88F7
TetR family transcriptional regulator
Tax=BJP_IG2102_Syntrophobacterales_60_12
13_1_40cm_scaffold_48_9
R_Rokubacteria_69_13, Rokubacteria, Bacteria

Not on your lists

4904..5704
DNA (801bp) protein (267aa)
Transcriptional regulator, IclR family Tax=RIFCSPHIGHO2_02_FULL_Rokubacteria_69_13_curated
Transcriptional regulator, IclR family id=14625722 bin=bin7_NC10_sister species=Achromobacter xylosoxidans genus=Achromobacter taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
iclR; IclR family transcriptional regulator
13_1_40cm_scaffold_48_10
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

6027..6458
DNA (432bp) protein (144aa)
gluconate 5-dehydrogenase; K00046 gluconate 5-dehydrogenase [EC:1.1.1.69] Tax=CSP1_6_Rokubacteria
gluconate 5-dehydrogenase; K00046 gluconate 5-dehydrogenase [EC:1.1.1.69] id=14625715 bin=bin7_NC10_sister species=Thermosinus carboxydivorans genus=Thermosinus taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=bin7_NC10_sister organism_group=NC10
3-oxoacyl-[acyl-carrier protein] reductase (EC:1.1.1.100)
13_1_40cm_scaffold_48_11
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

6463..7224
DNA (762bp) protein (254aa)
short-chain dehydrogenase/reductase SDR; K00046 gluconate 5-dehydrogenase [EC:1.1.1.69] id=14625717 bin=bin7_NC10_sister species=Rubrivivax gelatinosus genus=Rubrivivax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
short-chain dehydrogenase/reductase SDR; K00046 gluconate 5-dehydrogenase [EC:1.1.1.69] Tax=CSP1_6_Rokubacteria
gno; gluconate 5-dehydrogenase (EC:1.1.1.69)
13_1_40cm_scaffold_48_12
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

7221..8669
DNA (1449bp) protein (483aa)
pyruvate carboxylase subunit B; K01571 oxaloacetate decarboxylase, alpha subunit [EC:4.1.1.3] id=14625706 bin=bin7_NC10_sister species=Roseovarius sp. 217 genus=Roseovarius taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
pyruvate carboxylase subunit B; K01571 oxaloacetate decarboxylase, alpha subunit [EC:4.1.1.3] Tax=CSP1_6_Rokubacteria
carboxylase
13_1_40cm_scaffold_48_13
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

8670..10079
DNA (1410bp) protein (470aa)
hypothetical protein id=14625714 bin=bin7_NC10_sister species=Afipia felis genus=Afipia taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
hypothetical protein Tax=CSP1_6_Rokubacteria
hypothetical protein
13_1_40cm_scaffold_48_14
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

10076..11107
DNA (1032bp) protein (344aa)
ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components-like protein; K02051 NitT/TauT family transport system substrate-binding protein id=14625711 bin=bin7_NC10_sister species=Xanthobacter autotrophicus genus=Xanthobacter taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components-like protein; K02051 NitT/TauT family transport system substrate-binding protein Tax=CSP1_6_Rokubacteria
family 3 extracellular solute-binding protein
13_1_40cm_scaffold_48_15
Desulfomonile tiedjei, Desulfomonile, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11116..11955
DNA (840bp) protein (280aa)
ABC-type nitrate/sulfonate/bicarbonate transport system, permease component n=1 Tax=Desulfomonile tiedjei (strain ATCC 49306 / DSM 6799 / DCB-1) RepID=I4CDZ6_DESTA
ABC-type nitrate/sulfonate/bicarbonate transport system, permease component
ABC-type nitrate/sulfonate/bicarbonate transport system, permease component {ECO:0000313|EMBL:AFM27787.1}; TaxID=706587 species="Bacteria; Proteobacteria; Deltaproteobacteria; Syntrophobacterales; Syn
13_1_40cm_scaffold_48_16
RBG_13_Deltaproteobacteria_51_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11952..12698
DNA (747bp) protein (249aa)
ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component n=1 Tax=Desulfomonile tiedjei (strain ATCC 49306 / DSM 6799 / DCB-1) RepID=I4CDZ7_DESTA
ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component Tax=RBG_13_Deltaproteobacteria_51_10_curated
ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component
13_1_40cm_scaffold_48_17
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

12695..14101
DNA (1407bp) protein (469aa)
carboxylase Tax=CSP1_6_Rokubacteria
carboxylase id=14625708 bin=bin7_NC10_sister species=unknown genus=Bordetella taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
carboxylase
13_1_40cm_scaffold_48_18
Peptococcaceae bacterium BRH_c4a, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14128..14940
DNA (813bp) protein (271aa)
Uncharacterized protein {ECO:0000313|EMBL:KJS03305.1}; TaxID=1629716 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae.;" source="Peptococcaceae bacterium BRH_c4a.;"
Short-chain dehydrogenase/reductase SDR id=4547902 bin=GWC2_Methylomirabilis_70_16 species=Cupriavidus pinatubonensis genus=Cupriavidus taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
3-oxoacyl-(acyl-carrier-protein) reductase
13_1_40cm_scaffold_48_19
Methanocaldococcus infernus, Methanocaldococcus, Methanococcales, Methanococci, Euryarchaeota, Archaea

Not on your lists

comp(14982..15752)
DNA (771bp) protein (257aa)
ABC transporter related protein n=1 Tax=Methanocaldococcus infernus (strain DSM 11812 / JCM 15783 / ME) RepID=D5VS28_METIM
ABC transporter
ABC transporter related protein {ECO:0000313|EMBL:ADG13381.1}; TaxID=573063 species="Archaea; Euryarchaeota; Methanococci; Methanococcales; Methanocaldococcaceae; Methanocaldococcus.;" source="Methano
13_1_40cm_scaffold_48_20
Pandoraea pnomenusa, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15758..16642)
DNA (885bp) protein (295aa)
Nitrate/sulfonate/bicarbonate ABC transporter permease n=1 Tax=Pandoraea pnomenusa 3kgm RepID=V5PPI9_9BURK
nitrate/sulfonate/bicarbonate ABC transporter permease
Nitrate/sulfonate/bicarbonate ABC transporter permease {ECO:0000313|EMBL:AHB04866.1}; TaxID=1416914 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.
13_1_40cm_scaffold_48_21
Pandoraea pnomenusa, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16680..17999)
DNA (1320bp) protein (440aa)
Uncharacterized protein n=1 Tax=Pandoraea pnomenusa 3kgm RepID=V5PY76_9BURK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHB08277.1}; TaxID=1416914 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea pnomenusa
13_1_40cm_scaffold_48_22
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

comp(18025..20115)
DNA (2091bp) protein (697aa)
CoA-binding domain-containing protein id=14625700 bin=bin7_NC10_sister species=Afipia felis genus=Afipia taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
CoA-binding domain-containing protein Tax=CSP1_6_Rokubacteria
CoA-binding domain-containing protein
13_1_40cm_scaffold_48_23
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20112..21245)
DNA (1134bp) protein (378aa)
Thiolase n=1 Tax=Kyrpidia tusciae (strain DSM 2912 / NBRC 15312 / T2) RepID=D5WXR8_KYRT2
thiolase Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
thiolase
13_1_40cm_scaffold_48_24
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21242..21658)
DNA (417bp) protein (139aa)
Putative nucleic-acid-binding protein containing a Zn-ribbon n=1 Tax=Saccharomonospora marina XMU15 RepID=H5X746_9PSEU
hypothetical protein; K07068 Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
hypothetical protein
13_1_40cm_scaffold_48_25
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

comp(21655..23085)
DNA (1431bp) protein (477aa)
pyruvate carboxylase subunit B; K01571 oxaloacetate decarboxylase, alpha subunit [EC:4.1.1.3] id=14625706 bin=bin7_NC10_sister species=Roseovarius sp. 217 genus=Roseovarius taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
pyruvate carboxylase subunit B; K01571 oxaloacetate decarboxylase, alpha subunit [EC:4.1.1.3] Tax=CSP1_6_Rokubacteria
carboxylase
13_1_40cm_scaffold_48_26
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

comp(23082..24440)
DNA (1359bp) protein (453aa)
acetyl-CoA carboxylase biotin carboxylase subunit (EC:6.4.1.2); K01961 acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] id=14625707 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Cyanobacteria tax=bin7_NC10_sister organism_group=NC10
acetyl-CoA carboxylase biotin carboxylase subunit (EC:6.4.1.2); K01961 acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] Tax=CSP1_6_Rokubacteria
acetyl-CoA carboxylase subunit alpha (EC:6.4.1.1)
13_1_40cm_scaffold_48_27
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

comp(24437..24916)
DNA (480bp) protein (160aa)
biotin carboxyl carrier protein id=14625716 bin=bin7_NC10_sister species=Rubrobacter xylanophilus genus=Rubrobacter taxon_order=Rubrobacterales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin7_NC10_sister organism_group=NC10
biotin carboxyl carrier protein Tax=CSP1_6_Rokubacteria
biotin carboxyl carrier protein
13_1_40cm_scaffold_48_28
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24931..26055)
DNA (1125bp) protein (375aa)
putative TIM-barrel fold metal-dependent hydrolase Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
Putative uncharacterized protein id=1951607 bin=GWD2_Deltaproteobacteria_55_8 species=Mycobacterium parascrofulaceum genus=Mycobacterium taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
2-amino-3-carboxymuconate-6-semialdehyde decarboxylase
13_1_40cm_scaffold_48_29
RLO_Deltaproteobacteria_60_16, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26055..27689)
DNA (1635bp) protein (545aa)
AMP-dependent synthetase and ligase; K01897 long-chain acyl-CoA synthetase [EC:6.2.1.3] Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated
AMP-dependent synthetase and ligase n=1 Tax=Roseiflexus sp. (strain RS-1) RepID=A5UV23_ROSS1
AMP-dependent synthetase and ligase
13_1_40cm_scaffold_48_30
RLO_Deltaproteobacteria_60_16, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27656..27982)
DNA (327bp) protein (109aa)
Carboxymuconolactone decarboxylase n=1 Tax=Methanoregula boonei (strain 6A8) RepID=A7I4E1_METB6
Putative carboxymuconolactone decarboxylase Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated
carboxymuconolactone decarboxylase
Displaying items 1-30 of 37 in total

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