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13_1_40cm_scaffold_6388

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_6388_1
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

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1..273
DNA (273bp) protein (91aa)
amidohydrolase 3; K15358 enamidase [EC:3.5.2.18] Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Amidohydrolase 3 n=1 Tax=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) RepID=B9L3H1_THERP
amidohydrolase 3
13_1_40cm_scaffold_6388_2
R_Acidobacteria_61_28, Acidobacteria, Bacteria

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273..1322
DNA (1050bp) protein (350aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. STM 3809 RepID=H0T3S8_9BRAD
hypothetical protein; K07045 Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_curated
hypothetical protein
13_1_40cm_scaffold_6388_3
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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1513..2685
DNA (1173bp) protein (391aa)
id=5223130 bin=16ft_combo_ws3_JS1 species=16ft_combo_ws3 genus=16ft_combo_ws3 taxon_order=16ft_combo_ws3 taxon_class=16ft_combo_ws3 phylum=WS3 tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
id=5223130 Tax=RBG_16_RIF_WS3X_71_46_curated
13_1_40cm_scaffold_6388_4
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(2689..4425)
DNA (1737bp) protein (579aa)
thiamine pyrophosphate protein domain-containing protein TPP-binding protein; K01652 acetolactate synthase I/II/III large subunit [EC:2.2.1.6] Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
Thiamine pyrophosphate enzyme, C-TPP binding domain-containing protein id=1749075 bin=GWD2_Deltaproteobacteria_55_8 species=Streptomyces sp. e14 genus=Streptomyces taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
thiamine pyrophosphate protein domain-containing protein TPP-binding protein
13_1_40cm_scaffold_6388_5
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4492..4944
DNA (453bp) protein (151aa)
oxidoreductase n=1 Tax=Xanthobacteraceae RepID=UPI0003659723
oxidoreductase
Oxidoreductase {ECO:0000313|EMBL:AHF83941.1}; TaxID=754523 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizob
13_1_40cm_scaffold_6388_6
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4947..7013
DNA (2067bp) protein (689aa)
hypothetical protein n=1 Tax=Xanthobacteraceae RepID=UPI000361EDA1
isoquinoline 1-oxidoreductase
Isoquinoline 1-oxidoreductase {ECO:0000313|EMBL:AHF83940.1}; TaxID=754523 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;"
13_1_40cm_scaffold_6388_7
Rhizobium sp. CF080, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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7052..8023
DNA (972bp) protein (324aa)
ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component n=1 Tax=Rhizobium sp. CF080 RepID=J2QDZ7_9RHIZ
NMT1/THI5 like domain protein
Uncharacterized protein {ECO:0000313|EMBL:EUC01221.1}; Flags: Precursor;; TaxID=1144310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group
13_1_40cm_scaffold_6388_8
Streptomyces viridochromogenes, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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8028..8870
DNA (843bp) protein (281aa)
Putative Amidohydrolase 2 n=1 Tax=Streptomyces viridochromogenes Tue57 RepID=L8P3J0_STRVR
Putative Amidohydrolase 2 {ECO:0000313|EMBL:ELS51050.1}; TaxID=1160705 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces viridochromogenes Tu
hypothetical protein
13_1_40cm_scaffold_6388_9
RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated, Acidobacteria, Bacteria

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8870..9634
DNA (765bp) protein (255aa)
short-chain dehydrogenase/reductase SDR Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated
Short-chain dehydrogenase/reductase SDR id=1794586 bin=GWD2_Deltaproteobacteria_55_8 species=Streptomyces viridochromogenes genus=Streptomyces taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
short-chain dehydrogenase/reductase SDR
13_1_40cm_scaffold_6388_10
RBG_13_Deltaproteobacteria_65_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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10093..10368
DNA (276bp) protein (92aa)
prevent-host-death family protein Tax=RBG_13_Deltaproteobacteria_65_10_curated
prevent-host-death family protein id=14632219 bin=bin9_gal15 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin9_gal15 organism_group=GAL15
prevent-host-death family protein
13_1_40cm_scaffold_6388_11
R_Acidobacteria_59_13, Acidobacteria, Bacteria

Not on your lists

10761..12332
DNA (1572bp) protein (524aa)
hypothetical protein n=1 Tax=Pusillimonas noertemannii RepID=UPI00030B6B38
AMP-dependent synthetase and ligase Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_59_13_curated
AMP-dependent synthetase and ligase
13_1_40cm_scaffold_6388_12
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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comp(12283..13107)
DNA (825bp) protein (275aa)
Arabinose efflux permease family protein id=4221600 bin=GWA2_Methylomirabilis_73_35 species=Variovorax sp. CF313 genus=Variovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
major Facilitator Superfamily protein Tax=GWA2_Rokubacteria_73_35_curated
major facilitator superfamily permease
Displaying 12 items

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