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13_1_40cm_scaffold_90

Search features with annotation key words

Displaying items 1-30 of 33 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_90_1
Amycolatopsis mediterranei, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7..699)
DNA (693bp) protein (231aa)
Phosphatase-like protein n=3 Tax=Amycolatopsis mediterranei RepID=D8I372_AMYMU
phosphatase-related protein
Phosphatase-related protein {ECO:0000313|EMBL:AEK46498.1}; TaxID=713604 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis mediterranei (s
13_1_40cm_scaffold_90_2
CG_Rhodocyc_01, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

996..2147
DNA (1152bp) protein (384aa)
hypothetical protein n=1 Tax=Geopsychrobacter electrodiphilus RepID=UPI00037EDC14
extracellular ligand-binding receptor; K01999 branched-chain amino acid transport system substrate-binding protein Tax=CG_Rhodocyc_01
extracellular ligand-binding receptor
13_1_40cm_scaffold_90_3
CG_Rhodocyc_01, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2179..3075
DNA (897bp) protein (299aa)
Inner-membrane translocator n=1 Tax=Marinobacter adhaerens (strain HP15) RepID=E4PQQ9_MARAH
braD; high-affinity branched-chain amino acid transport system permease BraD Tax=CG_Rhodocyc_01
inner-membrane translocator
13_1_40cm_scaffold_90_4
RLO_Burkholderiales_61_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3078..4019
DNA (942bp) protein (314aa)
Putative permease component of ABC transporter n=1 Tax=alpha proteobacterium BAL199 RepID=A8TUZ5_9PROT
livM; high-affinity branched-chain amino acid transport system permease livM Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_61_40_curated
high-affinity branched-chain amino acid transport system permease livM
13_1_40cm_scaffold_90_5
CG_Rhodocyc_01, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4016..4774
DNA (759bp) protein (253aa)
Putative ATP-binding ABC transporter n=1 Tax=alpha proteobacterium BAL199 RepID=A8TUZ4_9PROT
livG; branched-chain amino acid transport ATP-binding protein LivG Tax=CG_Rhodocyc_01
branched-chain amino acid ABC transporter ATP-binding protein
13_1_40cm_scaffold_90_6
RLO_Rhodoferax_60_11, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4767..5411
DNA (645bp) protein (215aa)
ABC transporter related protein n=1 Tax=alpha proteobacterium BAL199 RepID=A8TUZ3_9PROT
putative ATP-binding component of ABC transporter; K01996 branched-chain amino acid transport system ATP-binding protein Tax=RIFCSPLOWO2_12_FULL_Rhodoferax_60_11_curated
putative high-affinity branched-chain amino acid transporter, ATP-binding component of ABC transporter (livF-like)
13_1_40cm_scaffold_90_7
RBG_16_RIF_CHLX_72_14_curated, RIF-CHLX, Bacteria

Not on your lists

comp(5414..6853)
DNA (1440bp) protein (480aa)
dihydropyrimidinase; K01464 dihydropyrimidinase [EC:3.5.2.2] Tax=RBG_16_RIF_CHLX_72_14_curated
dihydropyrimidinase (EC:3.5.2.2)
Dihydropyrimidinase id=3294270 bin=GWC2_Methylomirabilis_70_24 species=Pseudonocardia dioxanivorans genus=Pseudonocardia taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
13_1_40cm_scaffold_90_8
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6870..7298)
DNA (429bp) protein (143aa)
hypothetical protein n=1 Tax=SAR202 cluster bacterium SCGC AAA240-N13 RepID=UPI000376F23B
Uncharacterized protein {ECO:0000313|EMBL:ETW94153.1}; TaxID=1429438 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
glyoxalase
13_1_40cm_scaffold_90_9
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7523..8617
DNA (1095bp) protein (365aa)
L-alanine-DL-glutamate epimerase n=1 Tax=Ralstonia pickettii DTP0602 RepID=U3QI95_RALPI
Uncharacterized protein {ECO:0000313|EMBL:ETW97552.1}; TaxID=1429438 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
L-alanine-DL-glutamate epimerase
13_1_40cm_scaffold_90_10
unknown

Not on your lists

comp(8632..9408)
DNA (777bp) protein (259aa)

This feature has no annotations

13_1_40cm_scaffold_90_11
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(9651..10385)
DNA (735bp) protein (245aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
hypothetical protein id=4953741 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_scaffold_90_12
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(10386..11861)
DNA (1476bp) protein (492aa)
hypothetical protein Tax=GWA2_Rokubacteria_73_35_curated
hypothetical protein id=14626881 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
13_1_40cm_scaffold_90_13
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(11861..12511)
DNA (651bp) protein (217aa)
pilW; protein PilW; K02672 type IV pilus assembly protein PilW Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Type II secretory pathway component PulJ-like id=4953738 bin=GWA2_Methylomirabilis_73_35 species=Syntrophobacter fumaroxidans genus=Syntrophobacter taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_scaffold_90_14
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(12508..12936)
DNA (429bp) protein (143aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
hypothetical protein id=4953737 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_scaffold_90_15
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(13187..13495)
DNA (309bp) protein (103aa)
Antibiotic biosynthesis monooxygenase id=2216078 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Roseiflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
antibiotic biosynthesis monooxygenase Tax=GWA2_Rokubacteria_73_35_curated
antibiotic biosynthesis monooxygenase
13_1_40cm_scaffold_90_16
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13646..14839)
DNA (1194bp) protein (398aa)
Formyl-coenzyme A transferase (EC:2.8.3.16)
Formyl-CoA transferase n=1 Tax=Cupriavidus sp. HPC(L) RepID=V2I8Z6_9BURK
Uncharacterized protein {ECO:0000313|EMBL:ETW95254.1}; TaxID=1429438 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
13_1_40cm_scaffold_90_17
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

14894..16498
DNA (1605bp) protein (535aa)
ABC transporter substrate-binding protein id=14626481 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
ABC transporter substrate-binding protein Tax=CSP1_6_Rokubacteria
ABC transporter substrate-binding protein
13_1_40cm_scaffold_90_18
Roseomonas cervicalis, Roseomonas, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16500..17033)
DNA (534bp) protein (178aa)
Mandelate racemase/muconate lactonizing enzyme, C-terminal domain protein {ECO:0000313|EMBL:EFH12684.1}; EC=4.2.1.6 {ECO:0000313|EMBL:EFH12684.1};; TaxID=525371 species="Bacteria; Proteobacteria; Alph
Mandelate racemase/muconate lactonizing enzyme, C-terminal domain protein n=1 Tax=Roseomonas cervicalis ATCC 49957 RepID=D5RJ37_9PROT
hypothetical protein
13_1_40cm_scaffold_90_19
Roseomonas cervicalis, Roseomonas, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17033..17665)
DNA (633bp) protein (211aa)
Mandelate racemase/muconate lactonizing enzyme, C-terminal domain protein {ECO:0000313|EMBL:EFH12684.1}; EC=4.2.1.6 {ECO:0000313|EMBL:EFH12684.1};; TaxID=525371 species="Bacteria; Proteobacteria; Alph
Mandelate racemase/muconate lactonizing enzyme, C-terminal domain protein n=1 Tax=Roseomonas cervicalis ATCC 49957 RepID=D5RJ37_9PROT
mandelate racemase/muconate lactonizing protein
13_1_40cm_scaffold_90_20
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17662..18531)
DNA (870bp) protein (290aa)
alpha-ketoglutarate-dependent 2,4-dichlorophenoxyacetate dioxygenase (EC:1.14.11.17)
Alpha-ketoglutarate-dependent 2,4-dichlorophenoxyacetate dioxygenase (2,4-D dioxygenase) n=1 Tax=Bradyrhizobium sp. ORS 285 RepID=H0S523_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:ETW95583.1}; TaxID=1429438 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
13_1_40cm_scaffold_90_21
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

comp(18574..19797)
DNA (1224bp) protein (408aa)
multidrug transporter n=1 Tax=Marinococcus halotolerans RepID=UPI0003B6CCCC
major facilitator superfamily MFS_1 Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
hypothetical protein
13_1_40cm_scaffold_90_22
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

19844..21532
DNA (1689bp) protein (563aa)
sulfoacetaldehyde acetyltransferase (EC:2.2.1.6); K01652 acetolactate synthase I/II/III large subunit [EC:2.2.1.6] Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
sulfoacetaldehyde acetyltransferase (EC:2.2.1.6)
Putative Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain protein n=1 Tax=uncultured marine microorganism HF4000_APKG10K24 RepID=B3TCG8_9ZZZZ
13_1_40cm_scaffold_90_23
CG_Arma_01, Armatimonadetes, Bacteria

Not on your lists

comp(21529..22062)
DNA (534bp) protein (178aa)
hypothetical protein Tax=CG_Arma_01
Putative uncharacterized protein id=4425462 bin=GWF2_Bacteroidetes_43_11 species=Chitinophaga pinensis genus=Chitinophaga taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_43_11 organism_group=Bacteroidetes
hypothetical protein
13_1_40cm_scaffold_90_24
RLO_Rhodospirillales_67_15, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22059..22883)
DNA (825bp) protein (275aa)
hypothetical protein n=1 Tax=Bradyrhizobium elkanii RepID=UPI00035EF1FE
putative carboxyvinyl-carboxyphosphonate phosphorylmutase Tax=RIFCSPLOWO2_12_FULL_Rhodospirillales_67_15_curated
PEP phosphonomutase-related enzyme
13_1_40cm_scaffold_90_25
Pelosinus sp. UFO1, Pelosinus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(22892..24067)
DNA (1176bp) protein (392aa)
6-phosphogluconolactonase (EC:3.1.1.31)
6-phosphogluconolactonase {ECO:0000313|EMBL:AIF52548.1}; EC=3.1.1.31 {ECO:0000313|EMBL:AIF52548.1};; Flags: Precursor;; TaxID=484770 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veil
hypothetical protein n=1 Tax=Cupriavidus sp. BIS7 RepID=UPI000379C4C1
13_1_40cm_scaffold_90_26
R_Betaproteobacteria_64_14, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24064..25521)
DNA (1458bp) protein (486aa)
amidohydrolase n=1 Tax=Scytonema hofmanni RepID=UPI0003465913
hypothetical protein Tax=RIFCSPLOWO2_02_Betaproteobacteria_64_14_curated
amidohydrolase
13_1_40cm_scaffold_90_27
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

25634..27280
DNA (1647bp) protein (549aa)
thiamine pyrophosphate protein central region; K01652 acetolactate synthase I/II/III large subunit [EC:2.2.1.6] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Thiamine pyrophosphate protein id=4148695 bin=GWC2_Syntrophobacterales_56_13 species=Bacillus bataviensis genus=Bacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWC2_Syntrophobacterales_56_13 organism_group=Deltaproteobacteria organism_desc=Good +
thiamine pyrophosphate protein central region
13_1_40cm_scaffold_90_28
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

27582..28673
DNA (1092bp) protein (364aa)
formyl-CoA transferase (EC:2.8.3.16); K07749 formyl-CoA transferase [EC:2.8.3.16] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Formyl-CoA transferase n=3 Tax=Amycolatopsis mediterranei RepID=D8HV98_AMYMU
formyl-CoA transferase
13_1_40cm_scaffold_90_29
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(28651..29064)
DNA (414bp) protein (138aa)
Thioesterase superfamily protein n=1 Tax=Desulfovibrio fructosivorans JJ RepID=E1JWR7_DESFR
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
thioesterase superfamily domain protein
13_1_40cm_scaffold_90_30
Afipia sp. P52-10, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29072..29425)
DNA (354bp) protein (118aa)
hypothetical protein n=1 Tax=Bradyrhizobium elkanii RepID=UPI0002DE1235
Uncharacterized protein {ECO:0000313|EMBL:ETR75790.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;"
hypothetical protein
Displaying items 1-30 of 33 in total

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