ggKbase home page

13_1_40cm_scaffold_1234

Search features with annotation key words

Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_1234_1
unknown

Not on your lists

2..91
DNA (90bp) protein (30aa)

This feature has no annotations

13_1_40cm_scaffold_1234_2
Methyloversatilis universalis, Methyloversatilis, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(515..886)
DNA (372bp) protein (124aa)
Putative uncharacterized protein n=1 Tax=Methyloversatilis universalis FAM5 RepID=F5RBJ6_9RHOO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EGK72167.1}; TaxID=1000565 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Methyloversatilis.;" source="Methyloversatili
13_1_40cm_scaffold_1234_3
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(1144..2037)
DNA (894bp) protein (298aa)
Dehydrogenase (Modular protein) id=3428787 bin=GWC2_Methylomirabilis_70_16 species=Streptomyces cattleya genus=Streptomyces taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Dehydrogenase Tax=GWC2_Rokubacteria_70_16_curated
short chain dehydrogenase
13_1_40cm_scaffold_1234_4
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(2104..5424)
DNA (3321bp) protein (1107aa)
Uncharacterized protein n=1 Tax=Leptospirillum sp. Group II 'C75' RepID=U4QVD0_9BACT
hypothetical protein; K06860 uncharacterized protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
hypothetical protein
13_1_40cm_scaffold_1234_5
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

5953..6789
DNA (837bp) protein (279aa)
HNH endonuclease id=3240863 bin=GWC2_Methylomirabilis_70_16 species=Nakamurella multipartita genus=Nakamurella taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
HNH endonuclease Tax=GWC2_Rokubacteria_70_16_curated
HNH endonuclease
13_1_40cm_scaffold_1234_6
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

6789..7019
DNA (231bp) protein (77aa)
HNH endonuclease id=4689654 bin=GWC2_Methylomirabilis_70_16 species=Nakamurella multipartita genus=Nakamurella taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
HNH endonuclease Tax=GWC2_Rokubacteria_70_16_curated
13_1_40cm_scaffold_1234_7
RLO_Betaproteobacteria_68_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7052..8215)
DNA (1164bp) protein (388aa)
Beta-lactamase, putative n=1 Tax=alpha proteobacterium BAL199 RepID=A8TJZ0_9PROT
beta-lactamase Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_19_curated
beta-lactamase, putative
13_1_40cm_scaffold_1234_8
Kibdelosporangium sp. MJ126-NF4, Kibdelosporangium, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8352..9257
DNA (906bp) protein (302aa)
hypothetical protein n=1 Tax=Candidatus Poribacteria sp. WGA-4E RepID=UPI000379BCAF
Maltose/maltodextrin ABC transporter, permease protein MalF {ECO:0000313|EMBL:CEL20638.1}; TaxID=703222 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kibdelosporangium.;" s
carbohydrate ABC transporter membrane protein 1, CUT1 family
13_1_40cm_scaffold_1234_9
Kibdelosporangium sp. MJ126-NF4, Kibdelosporangium, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9254..10123
DNA (870bp) protein (290aa)
hypothetical protein n=1 Tax=Actinopolymorpha alba RepID=UPI00036A2784
Maltose/maltodextrin ABC transporter, permease protein MalG {ECO:0000313|EMBL:CEL20637.1}; TaxID=703222 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kibdelosporangium.;" s
sugar ABC transporter permease
13_1_40cm_scaffold_1234_10
Kibdelosporangium sp. MJ126-NF4, Kibdelosporangium, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10148..11464
DNA (1317bp) protein (439aa)
hypothetical protein n=1 Tax=Candidatus Poribacteria sp. WGA-4E RepID=UPI000360F337
Extracellular solute-binding protein, family 1 {ECO:0000313|EMBL:CEL20639.1}; TaxID=703222 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kibdelosporangium.;" source="Kibdel
bacterial extracellular solute-binding family protein
13_1_40cm_scaffold_1234_11
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11479..12354)
DNA (876bp) protein (292aa)
hypothetical protein n=1 Tax=gamma proteobacterium SCGC AB-629-K02 RepID=UPI0003751D68
polysaccharide deacetylase Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
hypothetical protein
13_1_40cm_scaffold_1234_12
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

12416..12703
DNA (288bp) protein (96aa)
id=2479197 bin=GWC2_Methylomirabilis_70_24 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
id=2479197 Tax=GWA2_Rokubacteria_70_23_curated
13_1_40cm_scaffold_1234_13
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

12798..13094
DNA (297bp) protein (99aa)
UPF0129 protein
hypothetical protein; K07065 Tax=GWA2_Rokubacteria_70_23_curated
Probable ribonuclease VapC id=2479200 bin=GWC2_Methylomirabilis_70_24 species=uncultured candidate division OP1 bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
13_1_40cm_scaffold_1234_14
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13106..14299
DNA (1194bp) protein (398aa)
Uncharacterized protein {ECO:0000313|EMBL:ETX00467.1}; Flags: Fragment;; TaxID=1429438 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheone
Acyl-CoA dehydrogenase domain protein id=4347745 bin=GWC2_Methylomirabilis_70_16 species=marine gamma proteobacterium HTCC2143 genus=unknown taxon_order=unknown taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
acyl-CoA dehydrogenase domain-containing protein
13_1_40cm_scaffold_1234_15
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14304..15413
DNA (1110bp) protein (370aa)
Acyl-CoA dehydrogenase domain protein n=1 Tax=uncultured prokaryote RepID=H5SPN0_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:ETX04111.1}; TaxID=1429439 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
acyl-CoA dehydrogenase domain-containing protein
Displaying 15 items

View Taxonomy