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13_1_20cm_2_scaffold_1237

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_2_scaffold_1237_1
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(1..897)
DNA (897bp) protein (299aa)
nitrate reductase (EC:1.7.99.4)
Nitrate reductase n=2 Tax=Chloroflexus RepID=A9WIA3_CHLAA
formate dehydrogenase Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
13_1_20cm_2_scaffold_1237_2
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(1054..2625)
DNA (1572bp) protein (524aa)
4Fe-4S ferredoxin iron-sulfur binding domain protein n=1 Tax=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) RepID=B9L4B5_THERP rbh
4Fe-4S ferredoxin Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
4Fe-4S ferredoxin
13_1_20cm_2_scaffold_1237_3
Leptothrix cholodnii, Leptothrix, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2723..3265)
DNA (543bp) protein (181aa)
Electron transport protein SCO1/SenC n=1 Tax=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) RepID=B1Y593_LEPCP
Electron transport protein SCO1/SenC {ECO:0000313|EMBL:ACB32323.1}; Flags: Precursor;; TaxID=395495 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Leptothrix.;" source="Leptot
electron transport protein SCO1/SenC
13_1_20cm_2_scaffold_1237_4
unknown

Not on your lists

comp(3265..3876)
DNA (612bp) protein (204aa)

This feature has no annotations

13_1_20cm_2_scaffold_1237_5
Marinobacter sp. EN3, Marinobacter, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3873..4655)
DNA (783bp) protein (261aa)
hypothetical protein n=1 Tax=Massilia niastensis RepID=UPI000368031E rbh
Sulfonate ABC transporter ATP-binding lipoprotein {ECO:0000313|EMBL:ERS00500.1}; TaxID=1397533 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Marinobacter.;
ABC transporter
13_1_20cm_2_scaffold_1237_6
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4652..5518)
DNA (867bp) protein (289aa)
hypothetical protein n=1 Tax=Rhodocyclaceae bacterium RZ94 RepID=UPI00036643E9 rbh
binding-protein dependent transport system inner membrane protein; K02050 NitT/TauT family transport system permease protein Tax=GWE1_Thiobacillus_62_9_curated
ABC-type nitrate/sulfonate/bicarbonate transport system
13_1_20cm_2_scaffold_1237_7
R_Betaproteobacteria_64_14, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5532..6962)
DNA (1431bp) protein (477aa)
ABC transporter sulfonate/nitrate transport system substrate-binding protein n=1 Tax=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) RepID=Q3SUV1_NITWN rbh
ABC transporter sulfonate/nitrate transport system substrate-binding protein; K02051 NitT/TauT family transport system substrate-binding protein Tax=RIFCSPLOWO2_02_Betaproteobacteria_64_14_curated
sulfonate/nitrate ABC transporter substrate-binding protein
13_1_20cm_2_scaffold_1237_8
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6978..7931)
DNA (954bp) protein (318aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9GAV2_SORC5
Uncharacterized protein {ECO:0000313|EMBL:CAN92915.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium ce
hypothetical protein
13_1_20cm_2_scaffold_1237_9
Streptomyces violaceusniger, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7928..8155)
DNA (228bp) protein (76aa)
4Fe-4S ferredoxin iron-sulfur binding domain-containing protein n=1 Tax=Streptomyces violaceusniger Tu 4113 RepID=G2PA52_STRVO
4Fe-4S ferredoxin iron-sulfur binding domain-containing protein {ECO:0000313|EMBL:AEM80560.1}; TaxID=653045 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" sour
4Fe-4S ferredoxin
13_1_20cm_2_scaffold_1237_10
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8167..9897)
DNA (1731bp) protein (577aa)
Fumarate reductase/succinate dehydrogenase flavoprotein {ECO:0000313|EMBL:CAN92913.1}; EC=1.3.99.1 {ECO:0000313|EMBL:CAN92913.1};; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria;
oxidoreductase (EC:1.3.99.1)
Fumarate reductase/succinate dehydrogenase flavoprotein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9GAU9_SORC5 rbh
13_1_20cm_2_scaffold_1237_11
Burkholderia gladioli, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9911..10720)
DNA (810bp) protein (270aa)
Transcriptional regulator n=1 Tax=Burkholderia gladioli (strain BSR3) RepID=F2LND6_BURGS
Transcriptional regulator {ECO:0000313|EMBL:AEA64099.1}; TaxID=999541 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia gla
UTRA domain protein
13_1_20cm_2_scaffold_1237_12
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(11043..11834)
DNA (792bp) protein (264aa)
Putative permease n=1 Tax=Thermaerobacter subterraneus DSM 13965 RepID=K6Q0Y3_9FIRM
hypothetical protein; K07090 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
hypothetical protein
13_1_20cm_2_scaffold_1237_13
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(11831..13285)
DNA (1455bp) protein (485aa)
Uncharacterized protein n=1 Tax=Desulfomonile tiedjei (strain ATCC 49306 / DSM 6799 / DCB-1) RepID=I4C1Y8_DESTA rbh
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
hypothetical protein
13_1_20cm_2_scaffold_1237_14
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(13295..13816)
DNA (522bp) protein (174aa)
Uncharacterized protein n=1 Tax=Azospirillum brasilense Sp245 RepID=G8B0L9_AZOBR
hypothetical protein Tax=GWA2_Rokubacteria_70_23_curated
membrane protein of unknown function
13_1_20cm_2_scaffold_1237_15
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(13818..14768)
DNA (951bp) protein (317aa)
Uncharacterized protein n=1 Tax=Desulfomonile tiedjei (strain ATCC 49306 / DSM 6799 / DCB-1) RepID=I4C1Z0_DESTA
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
hypothetical protein
13_1_20cm_2_scaffold_1237_16
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(14797..16374)
DNA (1578bp) protein (526aa)
fadD3; long-chain-fatty-acid--CoA ligase (EC:6.2.1.3); K01897 long-chain acyl-CoA synthetase [EC:6.2.1.3] Tax=GWA2_Rokubacteria_70_23_curated
AMP-dependent synthetase and ligase n=1 Tax=Thermaerobacter marianensis (strain ATCC 700841 / DSM 12885 / JCM 10246 / 7p75a) RepID=E6SM97_THEM7
AMP-dependent synthetase and ligase
13_1_20cm_2_scaffold_1237_17
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(16376..16921)
DNA (546bp) protein (182aa)
2-oxoglutarate ferredoxin oxidoreductase subunit gamma (EC:1.2.7.3); K00177 2-oxoglutarate ferredoxin oxidoreductase subunit gamma [EC:1.2.7.3] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
2-oxoacid:ferredoxin oxidoreductase, gamma subunit n=1 Tax=Desulfomonile tiedjei (strain ATCC 49306 / DSM 6799 / DCB-1) RepID=I4C1Z2_DESTA
2-oxoacid:ferredoxin oxidoreductase, gamma subunit
13_1_20cm_2_scaffold_1237_18
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(16921..17769)
DNA (849bp) protein (283aa)
2-oxoglutarate ferredoxin oxidoreductase subunit beta (EC:1.2.7.3); K00175 2-oxoglutarate ferredoxin oxidoreductase subunit beta [EC:1.2.7.3] Tax=GWA2_Rokubacteria_70_23_curated
2-oxoglutarate ferredoxin oxidoreductase subunit beta (EC:1.2.7.3)
2-oxoglutarate ferredoxin oxidoreductase, beta subunit n=1 Tax=Moorella thermoacetica (strain ATCC 39073) RepID=Q2RH06_MOOTA
13_1_20cm_2_scaffold_1237_19
unknown

Not on your lists

comp(17769..17888)
DNA (120bp) protein (40aa)

This feature has no annotations

13_1_20cm_2_scaffold_1237_20
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(17888..19066)
DNA (1179bp) protein (393aa)
2-oxoacid:ferredoxin oxidoreductase, alpha subunit n=1 Tax=Clostridium pasteurianum BC1 RepID=R4KD46_CLOPA rbh
2-oxoacid:ferredoxin oxidoreductase, alpha subunit Tax=GWA2_Rokubacteria_70_23_curated
2-oxoacid:ferredoxin oxidoreductase, alpha subunit
Displaying 20 items

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