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13_1_20cm_2_scaffold_2218

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_2_scaffold_2218_1
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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comp(3..1667)
DNA (1665bp) protein (555aa)
acetolactate synthase large subunit; K01652 acetolactate synthase I/II/III large subunit [EC:2.2.1.6] Tax=GWA2_Rokubacteria_73_35_curated
Thiamine pyrophosphate-dependent enzyme, possible carboligase or decarboxylase n=1 Tax=Bradyrhizobium sp. YR681 RepID=J3I2Y1_9BRAD
thiamine pyrophosphate protein central region
13_1_20cm_2_scaffold_2218_2
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

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comp(1741..3321)
DNA (1581bp) protein (527aa)
Mg chelatase-like protein n=1 Tax=delta proteobacterium NaphS2 RepID=D8F9U4_9DELT
transcriptional regulator Tax=CSP1_6_Rokubacteria
transcriptional regulator
13_1_20cm_2_scaffold_2218_3
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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3332..3718
DNA (387bp) protein (129aa)
Uncharacterized protein n=1 Tax=Korarchaeum cryptofilum (strain OPF8) RepID=B1L4N4_KORCO
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
hypothetical protein
13_1_20cm_2_scaffold_2218_4
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

3734..5149
DNA (1416bp) protein (472aa)
Two component, sigma54 specific, transcriptional regulator, Fis family n=1 Tax=Desulfotignum phosphitoxidans DSM 13687 RepID=S0FZC7_9DELT
two component, sigma54 specific, transcriptional regulator, Fis family; K07714 two-component system, NtrC family, response regulator AtoC Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
two component system response regulator, sigma54-specific
13_1_20cm_2_scaffold_2218_5
unknown

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5372..5497
DNA (126bp) protein (42aa)

This feature has no annotations

13_1_20cm_2_scaffold_2218_6
R_Rokubacteria_68_19, Rokubacteria, Bacteria

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5790..7046
DNA (1257bp) protein (419aa)
ABC-type transporter, periplasmic subunit n=1 Tax=Desulfococcus multivorans DSM 2059 RepID=S7UT73_DESML
ABC-type dipeptide transport system, periplasmic component Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
ABC-type dipeptide transport system, periplasmic component
13_1_20cm_2_scaffold_2218_7
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

7043..8965
DNA (1923bp) protein (641aa)
two component system sensor histidine kinase (EC:2.7.13.3)
Two component system sensor histidine kinase n=1 Tax=Desulfobacula toluolica (strain DSM 7467 / Tol2) RepID=K0NFH2_DESTT
integral membrane sensor signal transduction histidine kinase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
13_1_20cm_2_scaffold_2218_8
GWA2_Deltaproteobacteria_65_63_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8949..10091
DNA (1143bp) protein (381aa)
hypothetical protein n=1 Tax=Zavarzinella formosa RepID=UPI00031D38B0
putative PAS/PAC sensor protein Tax=GWA2_Deltaproteobacteria_65_63_curated
histidine kinase
13_1_20cm_2_scaffold_2218_9
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

comp(10104..11063)
DNA (960bp) protein (320aa)
hypothetical protein n=1 Tax=Alicyclobacillus pohliae RepID=UPI0003698F83
inner-membrane translocator; K01998 branched-chain amino acid transport system permease protein Tax=CSP1_6_Rokubacteria
branched-chain amino acid ABC-type transport system, permease component
13_1_20cm_2_scaffold_2218_10
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

comp(11068..11928)
DNA (861bp) protein (287aa)
Amino acid/amide ABC transporter membrane protein 1, HAAT family n=1 Tax=Desulfomonile tiedjei (strain ATCC 49306 / DSM 6799 / DCB-1) RepID=I4C818_DESTA
inner-membrane translocator; K01997 branched-chain amino acid transport system permease protein Tax=CSP1_6_Rokubacteria
amino acid/amide ABC transporter membrane protein 1, HAAT family
13_1_20cm_2_scaffold_2218_11
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

comp(12031..12738)
DNA (708bp) protein (236aa)
ABC transporter related protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V753_9BRAD
branched-chain amino acid ABC transporter ATP-binding protein; K01996 branched-chain amino acid transport system ATP-binding protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
livF; branched-chain amino acid ABC transporter ATPase
13_1_20cm_2_scaffold_2218_12
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

comp(12738..13523)
DNA (786bp) protein (262aa)
ABC transporter related n=1 Tax=Methylobacterium radiotolerans (strain ATCC 27329 / DSM 1819 / JCM 2831) RepID=B1M8H4_METRJ
ABC transporter; K01995 branched-chain amino acid transport system ATP-binding protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
ABC transporter
13_1_20cm_2_scaffold_2218_13
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

comp(13525..14340)
DNA (816bp) protein (272aa)
Extracellular ligand-binding receptor n=1 Tax=Afipia sp. 1NLS2 RepID=D6V754_9BRAD
amino acid/amide ABC transporter substrate-binding protein, HAAT family Tax=CSP1_6_Rokubacteria
ABC transporter substrate-binding protein
Displaying 13 items

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