ggKbase home page

GWC2_NC10X_70_24_gwc2_scaffold_6921

Search features with annotation key words

Displaying 25 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
GWC2_NC10X_70_24_gwc2_scaffold_6921_1
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(1..483)
DNA (483bp) protein (161aa)
dephospho-CoA kinase (EC:2.7.1.24); K00859 dephospho-CoA kinase [EC:2.7.1.24] Tax=GWA2_Rokubacteria_70_23_curated
Dephospho-CoA kinase id=4811697 bin=GWC2_Methylomirabilis_70_24 species=Thermobacillus composti genus=Thermobacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
dephospho-CoA kinase
GWC2_NC10X_70_24_gwc2_scaffold_6921_2
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(480..3017)
DNA (2538bp) protein (846aa)
DNA polymerase I (EC:2.7.7.7); K02335 DNA polymerase I [EC:2.7.7.7] Tax=GWA2_Rokubacteria_70_23_curated
DNA polymerase I (EC:2.7.7.7)
DNA polymerase I id=4811698 bin=GWC2_Methylomirabilis_70_24 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
GWC2_NC10X_70_24_gwc2_scaffold_6921_3
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(3326..3631)
DNA (306bp) protein (102aa)
Glutamate-ammonia-ligase adenylyltransferase id=4811699 bin=GWC2_Methylomirabilis_70_24 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
Glutamate-ammonia-ligase adenylyltransferase Tax=GWA2_Rokubacteria_70_23_curated
GWC2_NC10X_70_24_gwc2_scaffold_6921_4
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(3639..6701)
DNA (3063bp) protein (1021aa)
Glutamate-ammonia-ligase adenylyltransferase ([Glutamate--ammonia-ligase] adenylyltransferase) (Glutamine-synthetase adenylyltransferase) (ATase) (EC:2.7.7.42) Tax=GWA2_Rokubacteria_70_23_curated
Glutamate-ammonia-ligase adenylyltransferase ([Glutamate--ammonia-ligase] adenylyltransferase) (Glutamine-synthetase adenylyltransferase) (ATase) (EC:2.7.7.42)
Glutamate-ammonia-ligase adenylyltransferase id=4082217 bin=GWF2_Methylomirabilis_70_14 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
GWC2_NC10X_70_24_gwc2_scaffold_6921_5
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(6751..7089)
DNA (339bp) protein (113aa)
Nitrogen regulatory protein P-II id=4811700 bin=GWC2_Methylomirabilis_70_24 species=Deferribacter desulfuricans genus=Deferribacter taxon_order=Deferribacterales taxon_class=Deferribacteres phylum=Deferribacteres tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
glnB; nitrogen regulatory protein P-II; K04751 nitrogen regulatory protein P-II 1 Tax=GWA2_Rokubacteria_70_23_curated
glnB; nitrogen regulatory protein P-II
GWC2_NC10X_70_24_gwc2_scaffold_6921_6
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(7107..8600)
DNA (1494bp) protein (498aa)
glycogen/starch synthase (EC:2.4.1.21); K00703 starch synthase [EC:2.4.1.21] Tax=GWA2_Rokubacteria_70_23_curated
Glycogen synthase id=4082210 bin=GWF2_Methylomirabilis_70_14 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
glycogen/starch synthase
GWC2_NC10X_70_24_gwc2_scaffold_6921_7
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(8610..10214)
DNA (1605bp) protein (535aa)
Na/Pi-cotransporter II-related protein id=4082207 bin=GWF2_Methylomirabilis_70_14 species=unknown genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Na/Pi-cotransporter II-like protein; K03324 phosphate:Na+ symporter Tax=GWA2_Rokubacteria_70_23_curated
Na/Pi-cotransporter II-like protein
GWC2_NC10X_70_24_gwc2_scaffold_6921_8
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(10222..10851)
DNA (630bp) protein (210aa)
phosphoglycerate mutase; K15634 probable phosphoglycerate mutase [EC:5.4.2.1] Tax=GWA2_Rokubacteria_70_23_curated
Phosphoglycerate mutase id=4811703 bin=GWC2_Methylomirabilis_70_24 species=unknown genus=Chloroflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
phosphoglycerate mutase
GWC2_NC10X_70_24_gwc2_scaffold_6921_9
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(10913..12340)
DNA (1428bp) protein (476aa)
gltX; glutamyl-tRNA synthetase (EC:6.1.1.17); K01885 glutamyl-tRNA synthetase [EC:6.1.1.17] Tax=GWA2_Rokubacteria_70_23_curated
Glutamate--tRNA ligase id=4811704 bin=GWC2_Methylomirabilis_70_24 species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
gltX; glutamyl-tRNA ligase
GWC2_NC10X_70_24_gwc2_scaffold_6921_10
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(12361..13098)
DNA (738bp) protein (246aa)
putative oxidoreductase protein id=4811705 bin=GWC2_Methylomirabilis_70_24 species=Rhizobium etli genus=Rhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
short-chain dehydrogenase/reductase SDR Tax=GWC2_Rokubacteria_70_16_curated
ucpA1; short-chain dehydrogenase/reductase
GWC2_NC10X_70_24_gwc2_scaffold_6921_11
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(13095..14444)
DNA (1350bp) protein (450aa)
FAD linked oxidase domain protein id=4082194 bin=GWF2_Methylomirabilis_70_14 species=Gallionella capsiferriformans genus=Gallionella taxon_order=Gallionellales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
FAD linked oxidase domain-containing protein Tax=GWA2_Rokubacteria_70_23_curated
FAD linked oxidase
GWC2_NC10X_70_24_gwc2_scaffold_6921_12
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(14432..15316)
DNA (885bp) protein (295aa)
Putative conserved membrane protein id=4811706 bin=GWC2_Methylomirabilis_70_24 species=uncultured Acidobacteria bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
UbiA prenyltransferase Tax=GWA2_Rokubacteria_70_23_curated
UbiA prenyltransferase
GWC2_NC10X_70_24_gwc2_scaffold_6921_13
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(15329..16642)
DNA (1314bp) protein (438aa)
Nucleotide-sugar dehydrogenase id=4811707 bin=GWC2_Methylomirabilis_70_24 species=Gemmatimonas aurantiaca genus=Gemmatimonas taxon_order=Gemmatimonadales taxon_class=Gemmatimonadetes phylum=Gemmatimonadetes tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
nucleotide-sugar dehydrogenase Tax=GWA2_Rokubacteria_70_23_curated
nucleotide-sugar dehydrogenase
GWC2_NC10X_70_24_gwc2_scaffold_6921_14
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(16674..17777)
DNA (1104bp) protein (368aa)
glutamine--scyllo-inositol transaminase (EC:2.6.1.50) Tax=GWA2_Rokubacteria_70_23_curated
glutamine--scyllo-inositol transaminase (EC:2.6.1.50)
Glutamine--scyllo-inositol transaminase id=4811708 bin=GWC2_Methylomirabilis_70_24 species=unknown genus=Roseiflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
GWC2_NC10X_70_24_gwc2_scaffold_6921_15
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(17774..19939)
DNA (2166bp) protein (722aa)
organic solvent tolerance protein; K04744 LPS-assembly protein Tax=GWA2_Rokubacteria_70_23_curated
Organic solvent tolerance protein id=4811709 bin=GWC2_Methylomirabilis_70_24 species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
lipopolysaccharide biosynthesis protein
GWC2_NC10X_70_24_gwc2_scaffold_6921_16
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(19984..21291)
DNA (1308bp) protein (436aa)
FolC bifunctional protein id=4811710 bin=GWC2_Methylomirabilis_70_24 species=Myxococcus stipitatus genus=Myxococcus taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
tetrahydrofolylpolyglutamate synthase/dihydrofolate synthase Tax=GWA2_Rokubacteria_70_23_curated
tetrahydrofolylpolyglutamate synthase/dihydrofolate synthase
GWC2_NC10X_70_24_gwc2_scaffold_6921_17
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(21288..22148)
DNA (861bp) protein (287aa)
accD; acetyl-CoA carboxylase, carboxyl transferase, beta subunit (EC:6.4.1.2); K01963 acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2] Tax=GWA2_Rokubacteria_70_23_curated
Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta id=4811711 bin=GWC2_Methylomirabilis_70_24 species=Leptospirillum ferrodiazotrophum genus=Leptospirillum taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
acetyl-CoA carboxyl transferase
GWC2_NC10X_70_24_gwc2_scaffold_6921_18
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(22151..22951)
DNA (801bp) protein (267aa)
trpA; tryptophan synthase subunit alpha (EC:4.2.1.20); K01695 tryptophan synthase alpha chain [EC:4.2.1.20] Tax=GWA2_Rokubacteria_70_23_curated
trpA; tryptophan synthase subunit alpha (EC:4.2.1.20)
Tryptophan synthase alpha chain id=4811712 bin=GWC2_Methylomirabilis_70_24 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
GWC2_NC10X_70_24_gwc2_scaffold_6921_19
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(23079..24320)
DNA (1242bp) protein (414aa)
Tryptophan synthase beta chain id=4082179 bin=GWF2_Methylomirabilis_70_14 species=Caenispirillum salinarum genus=Caenispirillum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
trpB; tryptophan synthase subunit beta Tax=GWA2_Rokubacteria_70_23_curated
trpB1; tryptophan synthase subunit beta
GWC2_NC10X_70_24_gwc2_scaffold_6921_20
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(24329..24958)
DNA (630bp) protein (210aa)
trpF; N-(5'-phosphoribosyl)anthranilate isomerase (PRAI) (EC:5.3.1.24) Tax=GWA2_Rokubacteria_70_23_curated
trpF; N-(5'-phosphoribosyl)anthranilate isomerase (PRAI) (EC:5.3.1.24)
N-(5'-phosphoribosyl)anthranilate isomerase id=4082178 bin=GWF2_Methylomirabilis_70_14 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
GWC2_NC10X_70_24_gwc2_scaffold_6921_21
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(24960..25751)
DNA (792bp) protein (264aa)
indole-3-glycerol-phosphate synthase (EC:4.1.1.48); K01609 indole-3-glycerol phosphate synthase [EC:4.1.1.48] Tax=GWA2_Rokubacteria_70_23_curated
Indole-3-glycerol phosphate synthase id=4811715 bin=GWC2_Methylomirabilis_70_24 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
Indole-3-glycerol phosphate synthase
GWC2_NC10X_70_24_gwc2_scaffold_6921_22
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(25768..26922)
DNA (1155bp) protein (385aa)
Quinolinate phosphoribosyl transferase; K00763 nicotinate phosphoribosyltransferase [EC:2.4.2.11] Tax=GWA2_Rokubacteria_70_23_curated
Nicotinate phosphoribosyltransferase id=4811716 bin=GWC2_Methylomirabilis_70_24 species=unknown genus=Methanobacterium taxon_order=Methanobacteriales taxon_class=Methanobacteria phylum=Euryarchaeota tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
Quinolinate phosphoribosyl transferase
GWC2_NC10X_70_24_gwc2_scaffold_6921_23
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(27223..27732)
DNA (510bp) protein (170aa)
Uncharacterized protein id=4082175 bin=GWF2_Methylomirabilis_70_14 species=Cystobacter fuscus genus=Cystobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein Tax=GWA2_Rokubacteria_70_23_curated
hypothetical protein
GWC2_NC10X_70_24_gwc2_scaffold_6921_24
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(27845..28723)
DNA (879bp) protein (293aa)
galU; UTP-glucose-1-phosphate uridylyltransferase (EC:2.7.7.9); K00963 UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] Tax=GWA2_Rokubacteria_70_23_curated
galU; UTP-glucose-1-phosphate uridylyltransferase (EC:2.7.7.9)
UTP-glucose-1-phosphate uridylyltransferase id=4331075 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=Dictyoglomus taxon_order=Dictyoglomales taxon_class=Dictyoglomia phylum=Dictyoglomi tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
GWC2_NC10X_70_24_gwc2_scaffold_6921_25
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(28723..29349)
DNA (627bp) protein (209aa)
Transporter, small conductance mechanosensitive ion channel (MscS) family id=4811720 bin=GWC2_Methylomirabilis_70_24 species=Rhodothermus marinus genus=Rhodothermus taxon_order=Bacteroidetes Order II. Incertae sedis taxon_class=unknown phylum=Bacteroidetes tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
small conductance mechanosensitive ion channel (MscS) family protein; K03442 small conductance mechanosensitive channel Tax=GWA2_Rokubacteria_70_23_curated
small conductance mechanosensitive ion channel (MscS) family protein
Displaying 25 items

View Taxonomy