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RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_2459

Search features with annotation key words

Displaying items 1-30 of 39 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_2459_1
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(1..111)
DNA (111bp) protein (37aa)
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_2459_2
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(247..810)
DNA (564bp) protein (188aa)
pyruvate/ketoisovalerate oxidoreductase subunit gamma; K00177 2-oxoglutarate ferredoxin oxidoreductase subunit gamma [EC:1.2.7.3] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
Pyruvate/ketoisovalerate oxidoreductase, gamma subunit n=1 Tax=Desulfotomaculum kuznetsovii (strain DSM 6115 / VKM B-1805 / 17) RepID=F6CK76_DESK7
pyruvate/ketoisovalerate oxidoreductase subunit gamma
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_2459_3
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(807..1550)
DNA (744bp) protein (248aa)
thiamine pyrophosphate domain-containing TPP-binding protein; K00175 2-oxoglutarate ferredoxin oxidoreductase subunit beta [EC:1.2.7.3] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
Thiamine pyrophosphate protein domain protein TPP-binding protein n=1 Tax=Thermincola potens (strain JR) RepID=D5X7F6_THEPJ
thiamine pyrophosphate domain-containing TPP-binding protein
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_2459_4
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(1575..2729)
DNA (1155bp) protein (385aa)
pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein; K00174 2-oxoglutarate ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
Pyruvate flavodoxin/ferredoxin oxidoreductase domain protein n=1 Tax=Halanaerobium praevalens (strain ATCC 33744 / DSM 2228 / GSL) RepID=E3DMZ3_HALPG
pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_2459_5
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(2745..2993)
DNA (249bp) protein (83aa)
4Fe-4S ferredoxin; K00176 2-oxoglutarate ferredoxin oxidoreductase subunit delta [EC:1.2.7.3] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
4Fe-4S ferredoxin; K00176 2-oxoglutarate ferredoxin oxidoreductase subunit delta [EC:1.2.7.3] id=24493627 bin=RBG_19FT_COMBO_GAL15_69_19 species=Ammonifex degensii genus=Ammonifex taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
4Fe-4S ferredoxin
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_2459_6
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(3003..3458)
DNA (456bp) protein (152aa)
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_2459_7
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(3945..5306)
DNA (1362bp) protein (454aa)
MmgE/PrpD family protein n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C4Q5_SPHTD
MmgE/PrpD family protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
MmgE/PrpD family protein
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_2459_8
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(5308..6378)
DNA (1071bp) protein (357aa)
thiol-disulfide oxidoreductase domain-containing protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
thiol-disulfide oxidoreductase domain-containing protein id=14627159 bin=bin7_NC10_sister species=Sulfitobacter sp. EE-36 genus=Sulfitobacter taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
thiol-disulfide oxidoreductase domain-containing protein
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_2459_9
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(6401..6637)
DNA (237bp) protein (79aa)
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_2459_10
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(6653..6940)
DNA (288bp) protein (96aa)
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_2459_11
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(6937..8325)
DNA (1389bp) protein (463aa)
Uncharacterized protein n=1 Tax=Herbaspirillum sp. CF444 RepID=J3DLG4_9BURK
MmgE/PrpD family protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
mmgE/PrpD family protein
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_2459_12
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(8345..9256)
DNA (912bp) protein (304aa)
3-hydroxyisobutyrate dehydrogenase (EC:1.1.1.31); K00020 3-hydroxyisobutyrate dehydrogenase [EC:1.1.1.31] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
3-hydroxyisobutyrate dehydrogenase (EC:1.1.1.31)
hypothetical protein n=1 Tax=Candidatus Poribacteria sp. WGA-4E RepID=UPI0003710793
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_2459_13
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(9232..10137)
DNA (906bp) protein (302aa)
carboxyvinyl-carboxyphosphonate phosphorylmutase; K01003 carboxyvinyl-carboxyphosphonate phosphorylmutase [EC:2.7.8.23] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
hypothetical protein n=1 Tax=Streptomyces sulphureus RepID=UPI0002E91900
carboxyvinyl-carboxyphosphonate phosphorylmutase
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_2459_14
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(10141..10458)
DNA (318bp) protein (106aa)
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_2459_15
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(10477..12339)
DNA (1863bp) protein (621aa)
aldehyde:ferredoxin oxidoreductase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
Aldehyde ferredoxin oxidoreductase id=3580230 bin=GWC2_Methylomirabilis_70_16 species=uncultured marine crenarchaeote E48-1C genus=unknown taxon_order=unknown taxon_class=unknown phylum=Crenarchaeota tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
aldehyde:ferredoxin oxidoreductase
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_2459_16
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(12352..13671)
DNA (1320bp) protein (440aa)
putative TRAP family transmembrane transporter protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
Putative TRAP family transmembrane transporter protein id=2930704 bin=GWA2_Methylomirabilis_73_35 species=Citreicella sp. 357 genus=Citreicella taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
TRAP family transmembrane transporter protein
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_2459_17
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(13668..14195)
DNA (528bp) protein (176aa)
tripartite ATP-independent periplasmic transporter DctQ Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
hypothetical protein id=14627321 bin=bin7_NC10_sister species=Citreicella sp. 357 genus=Citreicella taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
tripartite ATP-independent periplasmic transporter DctQ
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_2459_18
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(14304..15419)
DNA (1116bp) protein (372aa)
putative substrate-binding component of transporter Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
putative exported solute binding protein id=14627322 bin=bin7_NC10_sister species=Rhizobium sp. genus=Rhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
TRAP dicarboxylate transporter substrate-binding protein DctP subunit
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_2459_19
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(15600..16526)
DNA (927bp) protein (309aa)
dihydrodipicolinate synthetase; K01714 dihydrodipicolinate synthase [EC:4.2.1.52] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
dihydrodipicolinate synthase; K01714 dihydrodipicolinate synthase [EC:4.2.1.52] id=14625209 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
dihydrodipicolinate synthetase
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_2459_20
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(16546..18096)
DNA (1551bp) protein (517aa)
Succinate dehydrogenase (EC:1.3.99.1); K13796 tricarballylate dehydrogenase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
Succinate dehydrogenase (EC:1.3.99.1)
Succinate dehydrogenase n=1 Tax=Sphingobium chlorophenolicum L-1 RepID=F6F2A5_SPHCR
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_2459_21
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(18093..19055)
DNA (963bp) protein (321aa)
3-hydroxyisobutyrate dehydrogenase (EC:1.1.1.31); K00020 3-hydroxyisobutyrate dehydrogenase [EC:1.1.1.31] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
3-hydroxyisobutyrate dehydrogenase (EC:1.1.1.31)
3-hydroxyisobutyrate dehydrogenase id=3352297 bin=GWA2_Methylomirabilis_73_35 species=Roseomonas cervicalis genus=Roseomonas taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_2459_22
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(19052..20227)
DNA (1176bp) protein (392aa)
chloromuconate cycloisomerase (EC:5.5.1.7) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
chloromuconate cycloisomerase (EC:5.5.1.7)
Chloromuconate cycloisomerase n=1 Tax=Sphingobium chlorophenolicum L-1 RepID=F6F2A7_SPHCR
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_2459_23
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(20224..21615)
DNA (1392bp) protein (464aa)
MmgE/PrpD family protein n=1 Tax=Sphingobium chlorophenolicum L-1 RepID=F6F2A3_SPHCR
MmgE/PrpD family protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
MmgE/PrpD family protein
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_2459_24
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(21634..23031)
DNA (1398bp) protein (466aa)
MmgE/PrpD family protein n=1 Tax=Sphingobium chlorophenolicum L-1 RepID=F6F2A4_SPHCR
MmgE/PrpD family protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
MmgE/PrpD family protein
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_2459_25
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(23028..23948)
DNA (921bp) protein (307aa)
Putative Zn-dependent hydrolases including glyoxylases n=1 Tax=Bradyrhizobium sp. STM 3843 RepID=H0TJG9_9BRAD
putative Zn-dependent hydrolase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
putative Zn-dependent hydrolase
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_2459_26
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(23926..24516)
DNA (591bp) protein (197aa)
Transcriptional regulator, AsnC family n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C9Z7_SPHTD
transcriptional regulator, AsnC family; K03718 Lrp/AsnC family transcriptional regulator, regulator for asnA, asnC and gidA Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
transcriptional regulator, AsnC family
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_2459_27
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

24703..24831
DNA (129bp) protein (43aa)
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_2459_trna_2
unknown

Not on your lists

comp(24906..24977)
DNA (72bp)
transferRNA
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_2459_trna_1
unknown

Not on your lists

comp(24999..25069)
DNA (71bp)
transferRNA
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_2459_28
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(25152..25424)
DNA (273bp) protein (91aa)
histone family protein DNA-binding protein; K03530 DNA-binding protein HU-beta Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
Histone family protein DNA-binding protein id=4493677 bin=GWC2_Methylomirabilis_70_16 species=Desulfurispirillum indicum genus=Desulfurispirillum taxon_order=Chrysiogenales taxon_class=Chrysiogenetes phylum=Chrysiogenetes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
histone family protein DNA-binding protein
Displaying items 1-30 of 39 in total

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