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RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_4918

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_4918_1
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(1..651)
DNA (651bp) protein (217aa)
short-chain dehydrogenase/reductase SDR; K00046 gluconate 5-dehydrogenase [EC:1.1.1.69] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
short-chain dehydrogenase/reductase SDR; K00046 gluconate 5-dehydrogenase [EC:1.1.1.69] id=14625717 bin=bin7_NC10_sister species=Rubrivivax gelatinosus genus=Rubrivivax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
short-chain dehydrogenase/reductase SDR
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_4918_2
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(648..2615)
DNA (1968bp) protein (656aa)
siaT; TRAP transporter, 4TM/12TM fusion protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
TRAP transporter, 4TM/12TM fusion protein id=14625718 bin=bin7_NC10_sister species=Roseovarius sp. 217 genus=Roseovarius taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
siaT; TRAP transporter, 4TM/12TM fusion protein
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_4918_3
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

3098..3550
DNA (453bp) protein (151aa)
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_4918_4
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(3840..5237)
DNA (1398bp) protein (466aa)
hypothetical protein; K07161 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
hypothetical protein; K07161 id=14625720 bin=bin7_NC10_sister species=Stigmatella aurantiaca genus=Stigmatella taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_4918_5
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(5244..6137)
DNA (894bp) protein (298aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
hypothetical protein id=14625721 bin=bin7_NC10_sister species=Roseovarius sp. 217 genus=Roseovarius taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_4918_6
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(6134..6910)
DNA (777bp) protein (259aa)
Transcriptional regulator, IclR family Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
Transcriptional regulator, IclR family id=14625722 bin=bin7_NC10_sister species=Achromobacter xylosoxidans genus=Achromobacter taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
Transcriptional regulator, IclR family
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_4918_7
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(7006..7773)
DNA (768bp) protein (256aa)
hypothetical protein; K07090 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
hypothetical protein; K07090 id=14625723 bin=bin7_NC10_sister species=Roseobacter sp. AzwK-3b genus=Roseobacter taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_4918_8
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(7786..9228)
DNA (1443bp) protein (481aa)
AMP-dependent synthetase and ligase; K01897 long-chain acyl-CoA synthetase [EC:6.2.1.3] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
AMP-dependent synthetase and ligase; K01897 long-chain acyl-CoA synthetase [EC:6.2.1.3] id=14625724 bin=bin7_NC10_sister species=Thermaerobacter marianensis genus=Thermaerobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=bin7_NC10_sister organism_group=NC10
AMP-dependent synthetase and ligase
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_4918_9
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(9541..10110)
DNA (570bp) protein (190aa)
2-oxoglutarate ferredoxin oxidoreductase subunit gamma (EC:1.2.7.3); K00177 2-oxoglutarate ferredoxin oxidoreductase subunit gamma [EC:1.2.7.3] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
2-oxoglutarate ferredoxin oxidoreductase subunit gamma (EC:1.2.7.3); K00177 2-oxoglutarate ferredoxin oxidoreductase subunit gamma [EC:1.2.7.3] id=14625725 bin=bin7_NC10_sister species=Moorella thermoacetica genus=Moorella taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=bin7_NC10_sister organism_group=NC10
2-oxoglutarate ferredoxin oxidoreductase subunit gamma
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_4918_10
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(10097..10945)
DNA (849bp) protein (283aa)
2-oxoglutarate ferredoxin oxidoreductase subunit beta (EC:1.2.7.3); K00175 2-oxoglutarate ferredoxin oxidoreductase subunit beta [EC:1.2.7.3] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
2-oxoglutarate ferredoxin oxidoreductase subunit beta (EC:1.2.7.3); K00175 2-oxoglutarate ferredoxin oxidoreductase subunit beta [EC:1.2.7.3] id=14625726 bin=bin7_NC10_sister species=Moorella thermoacetica genus=Moorella taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=bin7_NC10_sister organism_group=NC10
2-oxoglutarate ferredoxin oxidoreductase subunit beta (EC:1.2.7.3)
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_4918_11
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(10945..12186)
DNA (1242bp) protein (414aa)
2-oxoacid:ferredoxin oxidoreductase, alpha subunit Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
2-oxoacid:ferredoxin oxidoreductase, alpha subunit id=14625727 bin=bin7_NC10_sister species=Clostridium pasteurianum genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=bin7_NC10_sister organism_group=NC10
2-oxoacid:ferredoxin oxidoreductase, alpha subunit
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_4918_12
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(12202..12480)
DNA (279bp) protein (93aa)
4Fe-4S ferredoxin iron-sulfur binding domain-containing protein; K00176 2-oxoglutarate ferredoxin oxidoreductase subunit delta [EC:1.2.7.3] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
4Fe-4S ferredoxin iron-sulfur binding domain-containing protein; K00176 2-oxoglutarate ferredoxin oxidoreductase subunit delta [EC:1.2.7.3] id=14625728 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
4Fe-4S ferredoxin iron-sulfur binding domain-containing protein
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_4918_13
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(12461..13147)
DNA (687bp) protein (229aa)
GntR family transcriptional regulator Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
GntR family transcriptional regulator id=14625729 bin=bin7_NC10_sister species=Brucella ceti genus=Brucella taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
Transcriptional regulator, GntR family
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_4918_14
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(13273..13899)
DNA (627bp) protein (209aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
hypothetical protein id=14625730 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_4918_15
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(13896..14912)
DNA (1017bp) protein (339aa)
ABC transporter, substrate-binding component Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
ABC transporter, substrate-binding component id=14625731 bin=bin7_NC10_sister species=Sporomusa ovata genus=Sporomusa taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=bin7_NC10_sister organism_group=NC10
NMT1/THI5 like domain protein
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_4918_16
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(14927..15682)
DNA (756bp) protein (252aa)
binding-protein-dependent transport system inner membrane protein; K02050 NitT/TauT family transport system permease protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
binding-protein-dependent transport system inner membrane protein; K02050 NitT/TauT family transport system permease protein id=14625732 bin=bin7_NC10_sister species=Brevibacillus borstelensis genus=Brevibacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=bin7_NC10_sister organism_group=NC10
binding-protein-dependent transport systems inner membrane component
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_4918_17
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(15795..15923)
DNA (129bp) protein (43aa)
ABC transporter-like protein; K02049 NitT/TauT family transport system ATP-binding protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
ABC transporter-like protein; K02049 NitT/TauT family transport system ATP-binding protein id=14625733 bin=bin7_NC10_sister species=Kyrpidia tusciae genus=Kyrpidia taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=bin7_NC10_sister organism_group=NC10
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_4918_18
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

16404..16598
DNA (195bp) protein (65aa)
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
Displaying 18 items

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