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RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_5514

Search features with annotation key words

Displaying items 1-30 of 35 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_5514_1
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(3..1055)
DNA (1053bp) protein (351aa)
proton-translocating NADH-quinone oxidoreductase, chain M (EC:1.6.99.5); K00342 NADH-quinone oxidoreductase subunit M [EC:1.6.5.3] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
proton-translocating NADH-quinone oxidoreductase, chain M (EC:1.6.99.5); K00342 NADH-quinone oxidoreductase subunit M [EC:1.6.5.3] id=14626923 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
proton-translocating NADH-quinone oxidoreductase, chain M (EC:1.6.99.5)
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_5514_2
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(1055..2878)
DNA (1824bp) protein (608aa)
proton-translocating NADH-quinone oxidoreductase subunit L; K00341 NADH-quinone oxidoreductase subunit L [EC:1.6.5.3] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
proton-translocating NADH-quinone oxidoreductase subunit L; K00341 NADH-quinone oxidoreductase subunit L [EC:1.6.5.3] id=14626924 bin=bin7_NC10_sister species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=bin7_NC10_sister organism_group=NC10
proton-translocating NADH-quinone oxidoreductase subunit L
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_5514_3
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(2954..3253)
DNA (300bp) protein (100aa)
NADH-ubiquinone oxidoreductase subunit 4L; K00340 NADH-quinone oxidoreductase subunit K [EC:1.6.5.3] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
NADH-ubiquinone oxidoreductase subunit 4L; K00340 NADH-quinone oxidoreductase subunit K [EC:1.6.5.3] id=14626925 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
NADH-ubiquinone oxidoreductase subunit 4L
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_5514_4
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(3253..3747)
DNA (495bp) protein (165aa)
NADH-ubiquinone/plastoquinone oxidoreductase, chain 6; K00339 NADH-quinone oxidoreductase subunit J [EC:1.6.5.3] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
NADH-ubiquinone/plastoquinone oxidoreductase, chain 6; K00339 NADH-quinone oxidoreductase subunit J [EC:1.6.5.3] id=14626926 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
NADH-ubiquinone/plastoquinone oxidoreductase, chain 6
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_5514_5
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(3744..4271)
DNA (528bp) protein (176aa)
nuoI; NADH-quinone oxidoreductase subunit I (EC:1.6.99.5); K00338 NADH-quinone oxidoreductase subunit I [EC:1.6.5.3] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
nuoI; NADH-quinone oxidoreductase subunit I (EC:1.6.99.5); K00338 NADH-quinone oxidoreductase subunit I [EC:1.6.5.3] id=14626927 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
nuoI; NADH-quinone oxidoreductase subunit I (EC:1.6.99.5)
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_5514_6
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(4261..5238)
DNA (978bp) protein (326aa)
NADH dehydrogenase subunit H (EC:1.6.5.3); K00337 NADH-quinone oxidoreductase subunit H [EC:1.6.5.3] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
NADH dehydrogenase subunit H (EC:1.6.5.3); K00337 NADH-quinone oxidoreductase subunit H [EC:1.6.5.3] id=14626928 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
NADH dehydrogenase subunit H (EC:1.6.5.3)
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_5514_7
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(5238..6401)
DNA (1164bp) protein (388aa)
NADH dehydrogenase I, D subunit (EC:1.6.99.5); K00333 NADH-quinone oxidoreductase subunit D [EC:1.6.5.3] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
nuoD; NADH-quinone oxidoreductase subunit D (NADH dehydrogenase I, chain D) (NDH-1, chain D) (EC:1.6.5.3 1.6.99.5) id=14626929 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
NADH dehydrogenase I, D subunit (EC:1.6.99.5)
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_5514_8
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(6407..7051)
DNA (645bp) protein (215aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
hypothetical protein id=14626930 bin=bin7_NC10_sister species=Bradyrhizobium elkanii genus=Bradyrhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_5514_9
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(7061..7513)
DNA (453bp) protein (151aa)
NADH (or F420H2) dehydrogenase subunit C; K00332 NADH-quinone oxidoreductase subunit C [EC:1.6.5.3] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
NADH (or F420H2) dehydrogenase subunit C; K00332 NADH-quinone oxidoreductase subunit C [EC:1.6.5.3] id=14626931 bin=bin7_NC10_sister species=Thermobispora bispora genus=Thermobispora taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin7_NC10_sister organism_group=NC10
NADH (or F420H2) dehydrogenase subunit C
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_5514_10
R_Rokubacteria_69_13, Rokubacteria, Bacteria

Not on your lists

comp(7518..8150)
DNA (633bp) protein (211aa)
NAD; NADH-ubiquinone oxidoreductase 20 kDa subunit (NADH dehydrogenase subunit 10) (EC:1.6.5.3) Tax=RIFCSPHIGHO2_02_FULL_Rokubacteria_69_13_curated
NAD; NADH-ubiquinone oxidoreductase 20 kDa subunit (NADH dehydrogenase subunit 10) (EC:1.6.5.3) id=14626932 bin=bin7_NC10_sister species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=bin7_NC10_sister organism_group=NC10
NAD; NADH-ubiquinone oxidoreductase 20 kDa subunit (NADH dehydrogenase subunit 10) (EC:1.6.5.3)
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_5514_11
R_Rokubacteria_69_13, Rokubacteria, Bacteria

Not on your lists

comp(8147..8500)
DNA (354bp) protein (118aa)
NADH-ubiquinone/plastoquinone oxidoreductase subunit 3; K05574 NAD(P)H-quinone oxidoreductase subunit 3 [EC:1.6.5.3] Tax=RIFCSPHIGHO2_02_FULL_Rokubacteria_69_13_curated
nuoA; NADH-quinone oxidoreductase, subunit A id=14626933 bin=bin7_NC10_sister species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=bin7_NC10_sister organism_group=NC10
NADH-ubiquinone/plastoquinone oxidoreductase subunit 3
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_5514_trna_2
unknown

Not on your lists

comp(8603..8688)
DNA (86bp)
transferRNA
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_5514_trna_1
unknown

Not on your lists

8789..8861
DNA (73bp)
transferRNA
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_5514_12
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(8910..9170)
DNA (261bp) protein (87aa)
methylmalonyl-CoA epimerase; K05606 methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
methylmalonyl-CoA epimerase id=14627778 bin=bin7_NC10_sister species=Thermoanaerobacterium saccharolyticum genus=Thermoanaerobacterium taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=bin7_NC10_sister organism_group=NC10
methylmalonyl-CoA epimerase
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_5514_13
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

9565..9855
DNA (291bp) protein (97aa)
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_5514_14
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(9857..10636)
DNA (780bp) protein (260aa)
carboxymethylenebutenolidase; K01061 carboxymethylenebutenolidase [EC:3.1.1.45] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
Alpha/beta hydrolase fold protein-3 domain protein id=4458109 bin=GWC2_Methylomirabilis_70_24 species=Catenulispora acidiphila genus=Catenulispora taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
carboxymethylenebutenolidase
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_5514_15
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

10682..11464
DNA (783bp) protein (261aa)
alpha/beta hydrolase n=1 Tax=Bradyrhizobium elkanii RepID=UPI0002E615A1
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
hypothetical protein
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_5514_16
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

11666..12802
DNA (1137bp) protein (379aa)
MmgE/PrpD family protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
Putative uncharacterized protein id=4187612 bin=GWC2_Methylomirabilis_70_24 species=Burkholderia xenovorans genus=Burkholderia taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
MmgE/PrpD family protein
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_5514_17
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(12875..13594)
DNA (720bp) protein (240aa)
ABC transporter; K01996 branched-chain amino acid transport system ATP-binding protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
Branched-chain amino acid transport system ATP-binding protein id=2475296 bin=GWC2_Methylomirabilis_70_16 species=uncultured candidate division OP1 bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
ABC transporter
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_5514_18
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(13793..14440)
DNA (648bp) protein (216aa)
type 12 methyltransferase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
Methyltransferase type 12 id=2475298 bin=GWC2_Methylomirabilis_70_16 species=Nakamurella multipartita genus=Nakamurella taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
type 12 methyltransferase
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_5514_19
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(14418..15950)
DNA (1533bp) protein (511aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
Uncharacterized protein id=3209462 bin=GWC2_Methylomirabilis_70_24 species=Terriglobus roseus genus=Terriglobus taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
hypothetical protein
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_5514_20
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(15940..16650)
DNA (711bp) protein (237aa)
branched-chain amino acid ABC transporter ATPase; K01995 branched-chain amino acid transport system ATP-binding protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
ABC transport system protein id=2475300 bin=GWC2_Methylomirabilis_70_16 species=uncultured candidate division OP1 bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
livG; branched-chain amino acid ABC transporter ATPase
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_5514_21
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(16652..17572)
DNA (921bp) protein (307aa)
ABC transporter integral membrane subunit; K01998 branched-chain amino acid transport system permease protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
ABC transporter integral membrane subunit; K01998 branched-chain amino acid transport system permease protein id=14625355 bin=bin7_NC10_sister species=Flexistipes sinusarabici genus=Flexistipes taxon_order=Deferribacterales taxon_class=Deferribacteres phylum=Deferribacteres tax=bin7_NC10_sister organism_group=NC10
ABC transporter
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_5514_22
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(17569..18447)
DNA (879bp) protein (293aa)
branched-chain amino acid ABC transporter, membrane protein; K01997 branched-chain amino acid transport system permease protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
branched-chain amino acid ABC transporter, membrane protein; K01997 branched-chain amino acid transport system permease protein id=14625354 bin=bin7_NC10_sister species=Bacillus sp. ZYK genus=Bacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=bin7_NC10_sister organism_group=NC10
branched-chain amino acid ABC transporter membrane protein
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_5514_23
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(18525..19712)
DNA (1188bp) protein (396aa)
extracellular ligand-binding receptor; K01999 branched-chain amino acid transport system substrate-binding protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
extracellular ligand-binding receptor; K01999 branched-chain amino acid transport system substrate-binding protein id=14625353 bin=bin7_NC10_sister species=Idiomarina sp. A28L genus=Idiomarina taxon_order=Alteromonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
extracellular ligand-binding receptor
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_5514_24
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

19852..21054
DNA (1203bp) protein (401aa)
L-carnitine dehydratase/bile acid-inducible protein F Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
L-carnitine dehydratase/bile acid-inducible protein F id=14625352 bin=bin7_NC10_sister species=Thermaerobacter subterraneus genus=Thermaerobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=bin7_NC10_sister organism_group=NC10
L-carnitine dehydratase/bile acid-inducible protein F
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_5514_25
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(21044..21721)
DNA (678bp) protein (226aa)
ThiJ/PfpI domain-containing protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
ThiJ/PfpI domain-containing protein id=14625351 bin=bin7_NC10_sister species=Bacillus methanolicus genus=Bacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=bin7_NC10_sister organism_group=NC10
ThiJ/PfpI domain-containing protein
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_5514_26
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(21718..22611)
DNA (894bp) protein (298aa)
citrate lyase subunit beta; K01644 citrate lyase subunit beta / citryl-CoA lyase [EC:4.1.3.6 4.1.3.34] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
citrate lyase subunit beta; K01644 citrate lyase subunit beta / citryl-CoA lyase [EC:4.1.3.6 4.1.3.34] id=14625350 bin=bin7_NC10_sister species=Hoeflea phototrophica genus=Hoeflea taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
citrate lyase subunit beta
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_5514_27
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(22608..23072)
DNA (465bp) protein (155aa)
MaoC-like protein dehydratase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
MaoC-like protein dehydratase id=14625349 bin=bin7_NC10_sister species=Bacillus bataviensis genus=Bacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=bin7_NC10_sister organism_group=NC10
MaoC-like protein dehydratase
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_5514_28
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(23213..23614)
DNA (402bp) protein (134aa)
id=14625340 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
id=14625340 bin=bin7_NC10_sister tax=bin7_NC10_sister organism_group=NC10
Displaying items 1-30 of 35 in total

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