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RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_8136

Search features with annotation key words

Displaying items 1-30 of 44 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_8136_1
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

564..812
DNA (249bp) protein (83aa)
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_8136_2
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(1229..1993)
DNA (765bp) protein (255aa)
M23B family peptidase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
NlpD; membrane protein id=14626518 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
M23B family peptidase
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_8136_3
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(2002..2307)
DNA (306bp) protein (102aa)
acylphosphatase; K01512 acylphosphatase [EC:3.6.1.7] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
acylphosphatase; K01512 acylphosphatase [EC:3.6.1.7] id=14626517 bin=bin7_NC10_sister species=Meiothermus timidus genus=Meiothermus taxon_order=Thermales taxon_class=Deinococci phylum=Deinococcus-Thermus tax=bin7_NC10_sister organism_group=NC10
acylphosphatase
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_8136_trna_2
unknown

Not on your lists

comp(2431..2504)
DNA (74bp)
transferRNA
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_8136_4
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(2535..3221)
DNA (687bp) protein (229aa)
protein-L-isoaspartate O-methyltransferase; K00573 protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
protein-L-isoaspartate O-methyltransferase (EC:2.1.1.77); K00573 protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77] id=14626516 bin=bin7_NC10_sister species=Desulfobacca acetoxidans genus=Desulfobacca taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
protein-L-isoaspartate O-methyltransferase
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_8136_5
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(3227..4003)
DNA (777bp) protein (259aa)
surE; stationary phase survival protein SurE; K03787 5'-nucleotidase [EC:3.1.3.5] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
surE; stationary phase survival protein SurE; K03787 5'-nucleotidase [EC:3.1.3.5] id=14626515 bin=bin7_NC10_sister species=Desulfuromonas acetoxidans genus=Desulfuromonas taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
surE; 5'(3')-nucleotidase/polyphosphatase
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_8136_trna_1
unknown

Not on your lists

comp(4050..4123)
DNA (74bp)
transferRNA
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_8136_6
R_Rokubacteria_69_13, Rokubacteria, Bacteria

Not on your lists

comp(4160..4525)
DNA (366bp) protein (122aa)
putative transcriptional regulator Tax=RIFCSPHIGHO2_02_FULL_Rokubacteria_69_13_curated
putative transcriptional regulator id=14626514 bin=bin7_NC10_sister species=Terriglobus roseus genus=Terriglobus taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=bin7_NC10_sister organism_group=NC10
putative transcriptional regulator
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_8136_7
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

comp(4541..4822)
DNA (282bp) protein (94aa)
integration host factor subunit alpha; K04764 integration host factor subunit alpha id=14626513 bin=bin7_NC10_sister species=Geopsychrobacter electrodiphilus genus=Geopsychrobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
integration host factor subunit alpha; K04764 integration host factor subunit alpha Tax=CSP1_6_Rokubacteria
integration host factor subunit alpha
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_8136_8
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(4819..5154)
DNA (336bp) protein (112aa)
CutA1 divalent ion tolerance protein; K03926 periplasmic divalent cation tolerance protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
CutA1 divalent ion tolerance protein; K03926 periplasmic divalent cation tolerance protein id=14626512 bin=bin7_NC10_sister species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
CutA1 divalent ion tolerance protein
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_8136_9
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(5252..6196)
DNA (945bp) protein (315aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
id=14626511 bin=bin7_NC10_sister tax=bin7_NC10_sister organism_group=NC10
sporulation domain-containing protein
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_8136_10
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(6285..7325)
DNA (1041bp) protein (347aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
hypothetical protein id=14626510 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_8136_11
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(7322..8659)
DNA (1338bp) protein (446aa)
engA; GTP-binding protein engA Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
engA; GTP-binding protein EngA; K03977 GTP-binding protein id=14626509 bin=bin7_NC10_sister species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
engA; GTP-binding protein engA
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_8136_12
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(8659..9993)
DNA (1335bp) protein (445aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
Putative uncharacterized protein id=4555210 bin=GWF2_Methylomirabilis_70_14 species=Candidatus Desulforudis audaxviator genus=Candidatus Desulforudis taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_8136_13
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(9971..10537)
DNA (567bp) protein (189aa)
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase id=4849896 bin=GWC2_Methylomirabilis_70_16 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_8136_14
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(11021..11872)
DNA (852bp) protein (284aa)
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_8136_15
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(11940..12878)
DNA (939bp) protein (313aa)
tRNA delta(2)-isopentenylpyrophosphate transferase (EC:2.5.1.75); K00791 tRNA dimethylallyltransferase [EC:2.5.1.75] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
tRNA delta(2)-isopentenylpyrophosphate transferase (EC:2.5.1.75)
tRNA dimethylallyltransferase id=4430851 bin=GWC2_Methylomirabilis_70_24 species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_8136_16
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(12884..14563)
DNA (1680bp) protein (560aa)
mutL; DNA mismatch repair protein; K03572 DNA mismatch repair protein MutL Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
DNA mismatch repair protein MutL id=4430852 bin=GWC2_Methylomirabilis_70_24 species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
mutL; DNA mismatch repair protein
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_8136_17
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

14783..17386
DNA (2604bp) protein (868aa)
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_8136_18
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(17295..17783)
DNA (489bp) protein (163aa)
histidine triad (HIT) protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
histidine triad (HIT) protein id=14627237 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Armatimonadetes tax=bin7_NC10_sister organism_group=NC10
histidine triad (HIT) protein
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_8136_19
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

comp(17793..18068)
DNA (276bp) protein (92aa)
hupA1; DNA-binding protein HU 1; K05788 integration host factor subunit beta id=14627236 bin=bin7_NC10_sister species=Nitrospina sp. AB-629-B18 genus=Nitrospina taxon_order=Nitrospinales taxon_class=Nitrospinia phylum=Nitrospinae tax=bin7_NC10_sister organism_group=NC10
hupA1; DNA-binding protein HU 1; K05788 integration host factor subunit beta Tax=CSP1_6_Rokubacteria
nucleoid protein Hbs
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_8136_20
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(18220..19116)
DNA (897bp) protein (299aa)
peptidase S49, putative signal peptide peptidase SppA (EC:3.4.21.-); K04773 protease IV [EC:3.4.21.-] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
peptidase S49, putative signal peptide peptidase SppA (EC:3.4.21.-); K04773 protease IV [EC:3.4.21.-] id=14627235 bin=bin7_NC10_sister species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=bin7_NC10_sister organism_group=NC10
peptidase S49, putative signal peptide peptidase SppA (EC:3.4.21.-)
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_8136_21
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists


comp(19121..20830)
DNA (1710bp) protein (570aa)
rpsA; 30S ribosomal protein S1 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
rpsA; 30S ribosomal protein S1 id=14627234 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
rpsA; 30S ribosomal protein S1
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_8136_22
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(21507..22166)
DNA (660bp) protein (220aa)
cytidylate kinase (EC:2.7.4.14); K00945 cytidylate kinase [EC:2.7.4.14] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
cytidylate kinase (EC:2.7.4.14); K00945 cytidylate kinase [EC:2.7.4.14] id=14627232 bin=bin7_NC10_sister species=Geobacter lovleyi genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
cytidylate kinase (EC:2.7.4.14)
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_8136_23
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(22276..23589)
DNA (1314bp) protein (438aa)
3-phosphoshikimate 1-carboxyvinyltransferase; K00800 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
3-phosphoshikimate 1-carboxyvinyltransferase; K00800 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19] id=14627231 bin=bin7_NC10_sister species=Desulfotomaculum hydrothermale genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=bin7_NC10_sister organism_group=NC10
3-phosphoshikimate 1-carboxyvinyltransferase
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_8136_24
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

24072..24584
DNA (513bp) protein (171aa)
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_8136_25
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(24431..25546)
DNA (1116bp) protein (372aa)
hisC; histidinol-phosphate aminotransferase (EC:2.6.1.9) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
histidinol-phosphate aminotransferase (EC:2.6.1.9); K00817 histidinol-phosphate aminotransferase [EC:2.6.1.9] id=14627229 bin=bin7_NC10_sister species=Desulfobacca acetoxidans genus=Desulfobacca taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
hisC; histidinol-phosphate aminotransferase (EC:2.6.1.9)
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_8136_26
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(25556..26617)
DNA (1062bp) protein (354aa)
pheA; p-protein, bifunctional chorismate mutase/prephenate dehydratase (EC:4.2.1.51 5.4.99.5); K14170 chorismate mutase / prephenate dehydratase [EC:5.4.99.5 4.2.1.51] Tax=RIFCSPLOWO2_02_FULL_Rokubact
pheA; p-protein, bifunctional chorismate mutase/prephenate dehydratase (EC:4.2.1.51 5.4.99.5); K14170 chorismate mutase / prephenate dehydratase [EC:5.4.99.5 4.2.1.51] id=14627228 bin=bin7_NC10_sister species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=bin7_NC10_sister organism_group=NC10
pheA; p-protein, bifunctional chorismate mutase/prephenate dehydratase (EC:4.2.1.51 5.4.99.5)
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_8136_27
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

26872..27342
DNA (471bp) protein (157aa)
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_8136_28
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(27326..27946)
DNA (621bp) protein (207aa)
scpB; Segregation and condensation protein B Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
scpB; Segregation and condensation protein B id=14627226 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
scpB; Segregation and condensation protein B
Displaying items 1-30 of 44 in total

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