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RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_44948

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Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_44948_1
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

1..105
DNA (105bp) protein (35aa)
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_44948_2
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

181..504
DNA (324bp) protein (108aa)
Peroxiredoxin n=1 Tax=Desulfomonile tiedjei (strain ATCC 49306 / DSM 6799 / DCB-1) RepID=I4C4I8_DESTA
Peroxiredoxin Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
Peroxiredoxin
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_44948_3
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(533..757)
DNA (225bp) protein (75aa)
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_44948_4
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

1136..1621
DNA (486bp) protein (162aa)
hypothetical protein VcycZ_09425 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
hypothetical protein VcycZ_09425 id=2669489 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_44948_5
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

1659..2147
DNA (489bp) protein (163aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
Putative uncharacterized protein id=3733121 bin=GWA2_Methylomirabilis_73_35 species=Labrenzia aggregata genus=Labrenzia taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_44948_trna_1
unknown

Not on your lists

comp(2211..2283)
DNA (73bp)
transferRNA
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_44948_6
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(2367..2531)
DNA (165bp) protein (55aa)
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_44948_7
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(2694..3203)
DNA (510bp) protein (170aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
id=4877018 bin=GWC2_Nitrospirae_57_13 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Nitrospirae_57_13 organism_group=Nitrospirae organism_desc=Same as C1_57_7 and D2_57_8
hypothetical protein
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_44948_8
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(3412..4755)
DNA (1344bp) protein (448aa)
aldehyde ferredoxin oxidoreductase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
aldehyde ferredoxin oxidoreductase id=14626252 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_44948_9
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(5164..5430)
DNA (267bp) protein (89aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
hypothetical protein id=14626253 bin=bin7_NC10_sister species=Nitrospina gracilis genus=Nitrospina taxon_order=Nitrospinales taxon_class=Nitrospinia phylum=Nitrospinae tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_44948_10
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(5453..6301)
DNA (849bp) protein (283aa)
ycjP; ABC transporter permease; K02026 multiple sugar transport system permease protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
ycjP; ABC transporter permease; K02026 multiple sugar transport system permease protein id=14626254 bin=bin7_NC10_sister species=Ralstonia pickettii genus=Ralstonia taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
sugar ABC transporter permease
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_44948_11
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(6303..7151)
DNA (849bp) protein (283aa)
ABC transporter permease; K02025 multiple sugar transport system permease protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
ABC transporter permease; K02025 multiple sugar transport system permease protein id=14626255 bin=bin7_NC10_sister species=Cupriavidus sp. UYPR2.512 genus=Cupriavidus taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
ABC transporter permease
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_44948_12
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(7151..8281)
DNA (1131bp) protein (377aa)
sugar ABC transporter ATP binding protein; putative glycerol 3-phosphate transport protein, ugpC-like protein (EC:3.6.3.-) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
sugar ABC transporter ATP binding protein; putative glycerol 3-phosphate transport protein, ugpC-like protein (EC:3.6.3.-) id=14626256 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
sugar ABC transporter ATP binding protein; putative glycerol 3-phosphate transport protein, ugpC-like protein (EC:3.6.3.-)
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_44948_13
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(8356..8790)
DNA (435bp) protein (145aa)
sugar uptake ABC transporter; K02027 multiple sugar transport system substrate-binding protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
sugar uptake ABC transporter; K02027 multiple sugar transport system substrate-binding protein id=14626257 bin=bin7_NC10_sister species=Herbaspirillum sp. JC206 genus=Herbaspirillum taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
ABC transporter substrate-binding protein
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_44948_14
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

9357..9731
DNA (375bp) protein (125aa)
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_44948_15
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

10532..10741
DNA (210bp) protein (70aa)
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_44948_16
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(10881..12533)
DNA (1653bp) protein (551aa)
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_44948_17
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(12547..13365)
DNA (819bp) protein (273aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
hypothetical protein id=14626259 bin=bin7_NC10_sister species=Isosphaera pallida genus=Isosphaera taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=bin7_NC10_sister organism_group=NC10
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_44948_18
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(13356..13883)
DNA (528bp) protein (176aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
hypothetical protein id=14626259 bin=bin7_NC10_sister species=Isosphaera pallida genus=Isosphaera taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=bin7_NC10_sister organism_group=NC10
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_44948_19
R_Rokubacteria_69_13, Rokubacteria, Bacteria

Not on your lists

14029..14235
DNA (207bp) protein (69aa)
id=14626260 Tax=RIFCSPHIGHO2_02_FULL_Rokubacteria_69_13_curated
id=14626260 bin=bin7_NC10_sister tax=bin7_NC10_sister organism_group=NC10
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_44948_20
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

14222..15106
DNA (885bp) protein (295aa)
GntR family transcriptional regulator Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
GntR family transcriptional regulator id=14626261 bin=bin7_NC10_sister species=Rubrobacter xylanophilus genus=Rubrobacter taxon_order=Rubrobacterales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin7_NC10_sister organism_group=NC10
Bacterial regulatory protein, gntR family
Displaying 21 items

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