ggKbase home page

RIFCSPLOWO2_12_FULL_Methylomirabilis_71_19_rifcsplowo2_12_scaffold_20105

Search features with annotation key words

Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPLOWO2_12_FULL_Methylomirabilis_71_19_rifcsplowo2_12_scaffold_20105_1
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(48..413)
DNA (366bp) protein (122aa)
PilT protein domain protein id=4766441 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
PilT protein domain protein Tax=GWC2_Rokubacteria_70_16_curated
RIFCSPLOWO2_12_FULL_Methylomirabilis_71_19_rifcsplowo2_12_scaffold_20105_2
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(367..618)
DNA (252bp) protein (84aa)
Uncharacterized protein id=4766439 bin=GWC2_Methylomirabilis_70_16 species=mine drainage metagenome genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
prevent-host-death family protein Tax=GWC2_Rokubacteria_70_16_curated
prevent-host-death family protein
RIFCSPLOWO2_12_FULL_Methylomirabilis_71_19_rifcsplowo2_12_scaffold_20105_3
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(678..1430)
DNA (753bp) protein (251aa)
Enoyl-CoA hydratase id=4766437 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=Amycolatopsis taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
enoyl-CoA hydratase Tax=GWC2_Rokubacteria_70_16_curated
paaG; enoyl-CoA hydratase
RIFCSPLOWO2_12_FULL_Methylomirabilis_71_19_rifcsplowo2_12_scaffold_20105_4
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(1441..2103)
DNA (663bp) protein (221aa)
TENA/THI-4 family; K03707 thiaminase (transcriptional activator TenA) [EC:3.5.99.2] Tax=GWC2_Rokubacteria_70_16_curated
TENA/THI-4 family id=4766435 bin=GWC2_Methylomirabilis_70_16 species=Thermomicrobium roseum genus=Thermomicrobium taxon_order=Thermomicrobiales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
TENA/THI-4 family
RIFCSPLOWO2_12_FULL_Methylomirabilis_71_19_rifcsplowo2_12_scaffold_20105_5
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

2188..2607
DNA (420bp) protein (140aa)
Ppox class probable f420-dependent enzyme, family id=4766433 bin=GWC2_Methylomirabilis_70_16 species=Candidatus Caldiarchaeum subterraneum genus=Candidatus Caldiarchaeum taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
pyridoxamine 5'-phosphate oxidase FMN-binding protein Tax=GWC2_Rokubacteria_70_16_curated
pyridoxamine 5'-phosphate oxidase FMN-binding protein
RIFCSPLOWO2_12_FULL_Methylomirabilis_71_19_rifcsplowo2_12_scaffold_20105_6
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

2604..3542
DNA (939bp) protein (313aa)
formamidase (EC:3.5.1.49) Tax=GWC2_Rokubacteria_70_16_curated
Formamidase (EC:3.5.1.49)
Formamidase id=4766431 bin=GWC2_Methylomirabilis_70_16 species=Bacillus selenitireducens genus=Bacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
RIFCSPLOWO2_12_FULL_Methylomirabilis_71_19_rifcsplowo2_12_scaffold_20105_7
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(3535..4926)
DNA (1392bp) protein (464aa)
long-chain-fatty-acid--CoA ligase (EC:6.2.1.3) Tax=GWC2_Rokubacteria_70_16_curated
long-chain-fatty-acid--CoA ligase (EC:6.2.1.3)
Long-chain-fatty-acid--CoA ligase id=4766429 bin=GWC2_Methylomirabilis_70_16 species=Modestobacter marinus genus=Modestobacter taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
RIFCSPLOWO2_12_FULL_Methylomirabilis_71_19_rifcsplowo2_12_scaffold_20105_8
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(4991..6346)
DNA (1356bp) protein (452aa)
UbiD decarboxylase family protein id=3021522 bin=GWF2_Methylomirabilis_70_14 species=unknown genus=Desulfosporosinus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
UbiD family decarboxylase Tax=GWA2_Rokubacteria_70_23_curated
UbiD family decarboxylase
RIFCSPLOWO2_12_FULL_Methylomirabilis_71_19_rifcsplowo2_12_scaffold_20105_9
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(6369..6647)
DNA (279bp) protein (93aa)
acetolactate synthase large subunit; K01652 acetolactate synthase I/II/III large subunit [EC:2.2.1.6] Tax=GWA2_Rokubacteria_70_23_curated
Acetolactate synthase large subunit id=3021516 bin=GWF2_Methylomirabilis_70_14 species=Afipia felis genus=Afipia taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
thiamine pyrophosphate enzyme-like TPP-binding protein
RIFCSPLOWO2_12_FULL_Methylomirabilis_71_19_rifcsplowo2_12_scaffold_20105_10
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(6647..6826)
DNA (180bp) protein (60aa)
TRAP transporter 4TM/12TM fusion protein id=3021510 bin=GWF2_Methylomirabilis_70_14 species=Polymorphum gilvum genus=unknown taxon_order=unknown taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
TRAP transporter 4TM/12TM fusion protein Tax=GWA2_Rokubacteria_70_23_curated
Displaying 10 items

View Taxonomy