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RIFCSPLOWO2_12_FULL_Methylomirabilis_71_19_rifcsplowo2_12_scaffold_56075

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPLOWO2_12_FULL_Methylomirabilis_71_19_rifcsplowo2_12_scaffold_56075_1
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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1..144
DNA (144bp) protein (48aa)
hypothetical protein Tax=GWA2_Rokubacteria_70_23_curated
Alpha/beta hydrolase fold protein id=4923987 bin=GWC2_Methylomirabilis_70_16 species=Achromobacter arsenitoxydans genus=Achromobacter taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
RIFCSPLOWO2_12_FULL_Methylomirabilis_71_19_rifcsplowo2_12_scaffold_56075_2
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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953..1051
DNA (99bp) protein (33aa)
alpha/beta hydrolase Tax=GWA2_Rokubacteria_70_23_curated
RIFCSPLOWO2_12_FULL_Methylomirabilis_71_19_rifcsplowo2_12_scaffold_56075_3
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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comp(1078..1785)
DNA (708bp) protein (236aa)
ABC transporter ATP-binding protein, putative branched-chain amino acid transport; K01996 branched-chain amino acid transport system ATP-binding protein Tax=GWA2_Rokubacteria_70_23_curated
ABC transporter ATP-binding protein, putative branched-chain amino acid transport id=4923985 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=unknown taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
ABC transporter ATP-binding protein, putative branched-chain amino acid transport
RIFCSPLOWO2_12_FULL_Methylomirabilis_71_19_rifcsplowo2_12_scaffold_56075_4
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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comp(1794..2561)
DNA (768bp) protein (256aa)
ABC transporter related protein id=4923983 bin=GWC2_Methylomirabilis_70_16 species=Starkeya novella genus=Starkeya taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
ABC transporter; K01995 branched-chain amino acid transport system ATP-binding protein Tax=GWC2_Rokubacteria_70_16_curated
ABC transporter
RIFCSPLOWO2_12_FULL_Methylomirabilis_71_19_rifcsplowo2_12_scaffold_56075_5
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(2558..3514)
DNA (957bp) protein (319aa)
inner-membrane translocator; K01998 branched-chain amino acid transport system permease protein Tax=GWA2_Rokubacteria_70_23_curated
inner-membrane translocator; K01998 branched-chain amino acid transport system permease protein id=14626692 bin=bin7_NC10_sister species=Starkeya novella genus=Starkeya taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
branched-chain amino acid ABC transporter permease
RIFCSPLOWO2_12_FULL_Methylomirabilis_71_19_rifcsplowo2_12_scaffold_56075_6
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(3511..4398)
DNA (888bp) protein (296aa)
inner-membrane translocator; K01997 branched-chain amino acid transport system permease protein Tax=GWA2_Rokubacteria_70_23_curated
Inner-membrane translocator id=4923979 bin=GWC2_Methylomirabilis_70_16 species=Starkeya novella genus=Starkeya taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
inner-membrane translocator
RIFCSPLOWO2_12_FULL_Methylomirabilis_71_19_rifcsplowo2_12_scaffold_56075_7
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(4637..5920)
DNA (1284bp) protein (428aa)
ABC-type branched-chain amino acid transport systems, periplasmic component id=4923977 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=unknown taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hypothetical protein Tax=GWC2_Rokubacteria_70_16_curated
hypothetical protein
RIFCSPLOWO2_12_FULL_Methylomirabilis_71_19_rifcsplowo2_12_scaffold_56075_8
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(5946..6980)
DNA (1035bp) protein (345aa)
vitamin-B12 independent methionine synthase; K00549 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14] Tax=GWA2_Rokubacteria_70_23_curated
Methionine synthase (B12-independent) id=4923975 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=Roseiflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
vitamin-B12 independent methionine synthase
RIFCSPLOWO2_12_FULL_Methylomirabilis_71_19_rifcsplowo2_12_scaffold_56075_9
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(7030..8481)
DNA (1452bp) protein (484aa)
methylenetetrahydrofolate reductase; K00297 methylenetetrahydrofolate reductase (NADPH) [EC:1.5.1.20] Tax=GWA2_Rokubacteria_70_23_curated
methylenetetrahydrofolate reductase; K00297 methylenetetrahydrofolate reductase (NADPH) [EC:1.5.1.20] id=14628051 bin=bin7_NC10_sister species=Desulfurivibrio alkaliphilus genus=Desulfurivibrio taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
methylenetetrahydrofolate reductase
RIFCSPLOWO2_12_FULL_Methylomirabilis_71_19_rifcsplowo2_12_scaffold_56075_10
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(8478..9494)
DNA (1017bp) protein (339aa)
5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase; K00549 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14] Tax=GWA2_Rokubacteria_70_23_curated
5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase (EC:2.1.1.14)
5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase id=3703501 bin=GWF2_Methylomirabilis_70_14 species=Pseudonocardia dioxanivorans genus=Pseudonocardia taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
RIFCSPLOWO2_12_FULL_Methylomirabilis_71_19_rifcsplowo2_12_scaffold_56075_11
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(9665..11140)
DNA (1476bp) protein (492aa)
Putative uncharacterized protein id=3703499 bin=GWF2_Methylomirabilis_70_14 species=Pseudonocardia dioxanivorans genus=Pseudonocardia taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein Tax=GWA2_Rokubacteria_70_23_curated
hypothetical protein
RIFCSPLOWO2_12_FULL_Methylomirabilis_71_19_rifcsplowo2_12_scaffold_56075_12
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(11137..12171)
DNA (1035bp) protein (345aa)
acyl-CoA dehydrogenase-like; K00249 acyl-CoA dehydrogenase [EC:1.3.99.3] Tax=GWC2_Rokubacteria_70_16_curated
Acyl-CoA dehydrogenase id=3703497 bin=GWF2_Methylomirabilis_70_14 species=uncultured candidate division OP1 bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
acyl-CoA dehydrogenase domain-containing protein
RIFCSPLOWO2_12_FULL_Methylomirabilis_71_19_rifcsplowo2_12_scaffold_56075_13
unknown

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comp(12247..12336)
DNA (90bp) protein (30aa)
Putative uncharacterized protein id=3703493 bin=GWF2_Methylomirabilis_70_14 species=Candidatus Kuenenia stuttgartiensis genus=Candidatus Kuenenia taxon_order=Candidatus Brocadiales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Putative uncharacterized protein id=3703493 bin=GWF2_Methylomirabilis_70_14 species=Candidatus Kuenenia stuttgartiensis genus=Candidatus Kuenenia taxon_order=Candidatus Brocadiales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Displaying 13 items

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