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RIFCSPLOWO2_12_FULL_Methylomirabilis_71_19_rifcsplowo2_12_scaffold_25109

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPLOWO2_12_FULL_Methylomirabilis_71_19_rifcsplowo2_12_scaffold_25109_1
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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1..1278
DNA (1278bp) protein (426aa)
FAD dependent oxidoreductase; K00303 sarcosine oxidase, subunit beta [EC:1.5.3.1] Tax=GWA2_Rokubacteria_70_23_curated
FAD dependent oxidoreductase id=3080366 bin=GWC2_Methylomirabilis_70_24 species=unknown genus=Chloroflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
FAD dependent oxidoreductase
RIFCSPLOWO2_12_FULL_Methylomirabilis_71_19_rifcsplowo2_12_scaffold_25109_2
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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1268..2389
DNA (1122bp) protein (374aa)
muconate and chloromuconate cycloisomerase; K01856 muconate cycloisomerase [EC:5.5.1.1] Tax=GWA2_Rokubacteria_70_23_curated
muconate and chloromuconate cycloisomerase (EC:5.5.1.1)
Muconate and chloromuconate cycloisomerase id=3080367 bin=GWC2_Methylomirabilis_70_24 species=Pseudonocardia dioxanivorans genus=Pseudonocardia taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
RIFCSPLOWO2_12_FULL_Methylomirabilis_71_19_rifcsplowo2_12_scaffold_25109_3
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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2401..3381
DNA (981bp) protein (327aa)
TRAP transporter, solute receptor (TAXI family protein) id=4492332 bin=GWF2_Methylomirabilis_70_14 species=Nitratireductor indicus genus=Nitratireductor taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
TRAP transporter, solute receptor (TAXI family protein); K07080 Tax=GWA2_Rokubacteria_70_23_curated
TRAP transporter, solute receptor (TAXI family protein)
RIFCSPLOWO2_12_FULL_Methylomirabilis_71_19_rifcsplowo2_12_scaffold_25109_4
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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3384..5318
DNA (1935bp) protein (645aa)
TRAP transporter 4TM/12TM fusion protein Tax=GWA2_Rokubacteria_70_23_curated
TRAP transporter, 4TM/12TM fusion protein id=3080369 bin=GWC2_Methylomirabilis_70_24 species=Sphaerochaeta globosa genus=Sphaerochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
TRAP transporter 4TM/12TM fusion protein
RIFCSPLOWO2_12_FULL_Methylomirabilis_71_19_rifcsplowo2_12_scaffold_25109_trna_1
unknown

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comp(5562..5634)
DNA (73bp)
transferRNA
RIFCSPLOWO2_12_FULL_Methylomirabilis_71_19_rifcsplowo2_12_scaffold_25109_5
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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comp(5638..6789)
DNA (1152bp) protein (384aa)
Phage integrase protein (DNA breaking and rejoining enzyme) id=4701568 bin=GWC2_Methylomirabilis_70_24 species=Desulfobacterium autotrophicum genus=Desulfobacterium taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
phage integrase protein (DNA breaking and rejoining enzyme) Tax=GWA2_Rokubacteria_70_23_curated
phage integrase protein (DNA breaking and rejoining enzyme)
RIFCSPLOWO2_12_FULL_Methylomirabilis_71_19_rifcsplowo2_12_scaffold_25109_6
unknown

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comp(6854..7165)
DNA (312bp) protein (104aa)

This feature has no annotations

RIFCSPLOWO2_12_FULL_Methylomirabilis_71_19_rifcsplowo2_12_scaffold_25109_7
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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comp(7367..7546)
DNA (180bp) protein (60aa)
Putative transcriptional regulatory protein id=4139280 bin=GWF2_Methylomirabilis_70_14 species=Streptomyces venezuelae genus=Streptomyces taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
putative transcriptional regulatory protein Tax=GWA2_Rokubacteria_70_23_curated
RIFCSPLOWO2_12_FULL_Methylomirabilis_71_19_rifcsplowo2_12_scaffold_25109_8
CG_Arma_02, Armatimonadetes, Bacteria

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comp(7693..8175)
DNA (483bp) protein (161aa)
Transposase ISLbp6 n=1 Tax=mine drainage metagenome RepID=T1BVA4_9ZZZZ
transposase ISLbp6 Tax=CG_Arma_02
transposase ISLbp6
RIFCSPLOWO2_12_FULL_Methylomirabilis_71_19_rifcsplowo2_12_scaffold_25109_9
unknown

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8417..8758
DNA (342bp) protein (114aa)

This feature has no annotations

RIFCSPLOWO2_12_FULL_Methylomirabilis_71_19_rifcsplowo2_12_scaffold_25109_10
unknown

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8755..9081
DNA (327bp) protein (109aa)

This feature has no annotations

RIFCSPLOWO2_12_FULL_Methylomirabilis_71_19_rifcsplowo2_12_scaffold_25109_11

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9309..9569
DNA (261bp) protein (87aa)
Uncharacterized protein n=1 Tax=mine drainage metagenome RepID=E6Q0D5_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:CBI00644.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
hypothetical protein
RIFCSPLOWO2_12_FULL_Methylomirabilis_71_19_rifcsplowo2_12_scaffold_25109_12

Not on your lists

9576..10031
DNA (456bp) protein (152aa)
Uncharacterized protein n=1 Tax=mine drainage metagenome RepID=E6Q0D6_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:CBI00645.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
hypothetical protein
RIFCSPLOWO2_12_FULL_Methylomirabilis_71_19_rifcsplowo2_12_scaffold_25109_13
unknown

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comp(10406..10486)
DNA (81bp) protein (27aa)

This feature has no annotations

Displaying 14 items

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