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RIFCSPLOWO2_12_FULL_Methylomirabilis_71_19_rifcsplowo2_12_scaffold_6392

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Displaying items 1-30 of 32 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPLOWO2_12_FULL_Methylomirabilis_71_19_rifcsplowo2_12_scaffold_6392_1
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(119..880)
DNA (762bp) protein (254aa)
protein of unknown function DUF81 Tax=GWC2_Rokubacteria_70_16_curated
Putative uncharacterized protein id=4766447 bin=GWC2_Methylomirabilis_70_16 species=Thioalkalivibrio nitratireducens genus=Thioalkalivibrio taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
protein of unknown function DUF81
RIFCSPLOWO2_12_FULL_Methylomirabilis_71_19_rifcsplowo2_12_scaffold_6392_2
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

1795..3834
DNA (2040bp) protein (680aa)
guanylate cyclase Tax=GWC2_Rokubacteria_70_16_curated
Adenylate/guanylate cyclase id=4766451 bin=GWC2_Methylomirabilis_70_16 species=Cupriavidus necator genus=Cupriavidus taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hypothetical protein
RIFCSPLOWO2_12_FULL_Methylomirabilis_71_19_rifcsplowo2_12_scaffold_6392_3
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

3836..4462
DNA (627bp) protein (209aa)
id=4766453 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
id=4766453 Tax=GWC2_Rokubacteria_70_16_curated
RIFCSPLOWO2_12_FULL_Methylomirabilis_71_19_rifcsplowo2_12_scaffold_6392_4
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

4575..5621
DNA (1047bp) protein (349aa)
FMN-dependent alpha-hydroxy acid dehydrogenase; K00104 glycolate oxidase [EC:1.1.3.15] Tax=GWC2_Rokubacteria_70_16_curated
FMN-dependent alpha-hydroxy acid dehydrogenase id=4766454 bin=GWC2_Methylomirabilis_70_16 species=Rubrobacter xylanophilus genus=Rubrobacter taxon_order=Rubrobacterales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
FMN-dependent alpha-hydroxy acid dehydrogenase
RIFCSPLOWO2_12_FULL_Methylomirabilis_71_19_rifcsplowo2_12_scaffold_6392_5
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(5767..6459)
DNA (693bp) protein (231aa)
hypothetical protein Tax=GWC2_Rokubacteria_70_16_curated
Uncharacterized protein id=4766456 bin=GWC2_Methylomirabilis_70_16 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hypothetical protein
RIFCSPLOWO2_12_FULL_Methylomirabilis_71_19_rifcsplowo2_12_scaffold_6392_6
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(6480..7946)
DNA (1467bp) protein (489aa)
id=4766457 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
id=4766457 Tax=GWC2_Rokubacteria_70_16_curated
RIFCSPLOWO2_12_FULL_Methylomirabilis_71_19_rifcsplowo2_12_scaffold_6392_7
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(7970..9181)
DNA (1212bp) protein (404aa)
L-carnitine dehydratase/bile acid-inducible protein F id=4766458 bin=GWC2_Methylomirabilis_70_16 species=Rhodopseudomonas palustris genus=Rhodopseudomonas taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
L-carnitine dehydratase/bile acid-inducible protein F Tax=GWC2_Rokubacteria_70_16_curated
L-carnitine dehydratase/bile acid-inducible protein F
RIFCSPLOWO2_12_FULL_Methylomirabilis_71_19_rifcsplowo2_12_scaffold_6392_8
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(9288..9761)
DNA (474bp) protein (158aa)
Putative uncharacterized protein id=4766459 bin=GWC2_Methylomirabilis_70_16 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hypothetical protein; K09122 hypothetical protein Tax=GWC2_Rokubacteria_70_16_curated
hypothetical protein
RIFCSPLOWO2_12_FULL_Methylomirabilis_71_19_rifcsplowo2_12_scaffold_6392_9
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(9833..10477)
DNA (645bp) protein (215aa)
TetR-family transcriptional regulator id=4766470 bin=GWC2_Methylomirabilis_70_16 species=Mycobacterium parascrofulaceum genus=Mycobacterium taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
TetR family transcriptional regulator Tax=GWC2_Rokubacteria_70_16_curated
TetR family transcriptional regulator
RIFCSPLOWO2_12_FULL_Methylomirabilis_71_19_rifcsplowo2_12_scaffold_6392_10
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

10574..12715
DNA (2142bp) protein (714aa)
all-trans-retinol 13,14-reductase (EC:1.3.99.23) Tax=GWC2_Rokubacteria_70_16_curated
all-trans-retinol 13,14-reductase (EC:1.3.99.23)
All-trans-retinol 13,14-reductase id=4766472 bin=GWC2_Methylomirabilis_70_16 species=Desulfotomaculum kuznetsovii genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
RIFCSPLOWO2_12_FULL_Methylomirabilis_71_19_rifcsplowo2_12_scaffold_6392_11
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(12944..13396)
DNA (453bp) protein (151aa)
id=4766474 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
id=4766474 Tax=GWC2_Rokubacteria_70_16_curated
RIFCSPLOWO2_12_FULL_Methylomirabilis_71_19_rifcsplowo2_12_scaffold_6392_12
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(13414..13701)
DNA (288bp) protein (96aa)
id=4766475 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
id=4766475 Tax=GWC2_Rokubacteria_70_16_curated
RIFCSPLOWO2_12_FULL_Methylomirabilis_71_19_rifcsplowo2_12_scaffold_6392_13
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(13935..15239)
DNA (1305bp) protein (435aa)
hypothetical protein Tax=GWA2_Rokubacteria_70_23_curated
Phytoene dehydrogenase family protein id=3327028 bin=GWF2_Methylomirabilis_70_14 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
phytoene dehydrogenase family protein
RIFCSPLOWO2_12_FULL_Methylomirabilis_71_19_rifcsplowo2_12_scaffold_6392_14
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

15389..16033
DNA (645bp) protein (215aa)
Bacterial regulatory protein, TetR family protein 23 id=4283046 bin=GWC2_Methylomirabilis_70_16 species=Achromobacter xylosoxidans genus=Achromobacter taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
TetR family transcriptional regulator Tax=GWC2_Rokubacteria_70_16_curated
TetR family transcriptional regulator
RIFCSPLOWO2_12_FULL_Methylomirabilis_71_19_rifcsplowo2_12_scaffold_6392_15
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

16011..17633
DNA (1623bp) protein (541aa)
methylmalonyl-CoA mutase (EC:5.4.99.2); K01848 methylmalonyl-CoA mutase, N-terminal domain [EC:5.4.99.2] Tax=GWC2_Rokubacteria_70_16_curated
methylmalonyl-CoA mutase (EC:5.4.99.2)
Methylmalonyl-CoA mutase, large subunit id=4283044 bin=GWC2_Methylomirabilis_70_16 species=Caldalkalibacillus thermarum genus=Caldalkalibacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
RIFCSPLOWO2_12_FULL_Methylomirabilis_71_19_rifcsplowo2_12_scaffold_6392_16
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

17636..18067
DNA (432bp) protein (144aa)
cobalamin B12-binding domain-containing protein; K01849 methylmalonyl-CoA mutase, C-terminal domain [EC:5.4.99.2] Tax=GWC2_Rokubacteria_70_16_curated
Cobalamin B12-binding domain protein id=4283042 bin=GWC2_Methylomirabilis_70_16 species=Thermotoga lettingae genus=Thermotoga taxon_order=Thermotogales taxon_class=Thermotogae phylum=Thermotogae tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
cobalamin B12-binding domain-containing protein
RIFCSPLOWO2_12_FULL_Methylomirabilis_71_19_rifcsplowo2_12_scaffold_6392_17
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

18079..19557
DNA (1479bp) protein (493aa)
benzoyl-CoA reductase subunit B; K04113 benzoyl-CoA reductase subunit [EC:1.3.7.8] Tax=GWC2_Rokubacteria_70_16_curated
Benzoyl-CoA reductase, subunit B id=4283040 bin=GWC2_Methylomirabilis_70_16 species=mine drainage metagenome genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
benzoyl-CoA reductase subunit B
RIFCSPLOWO2_12_FULL_Methylomirabilis_71_19_rifcsplowo2_12_scaffold_6392_18
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

19585..20205
DNA (621bp) protein (207aa)
UPF0301 protein DAMO_1713 id=4283038 bin=GWC2_Methylomirabilis_70_16 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hypothetical protein Tax=GWC2_Rokubacteria_70_16_curated
hypothetical protein
RIFCSPLOWO2_12_FULL_Methylomirabilis_71_19_rifcsplowo2_12_scaffold_6392_19
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

20245..20706
DNA (462bp) protein (154aa)
id=4283037 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
id=4283037 Tax=GWC2_Rokubacteria_70_16_curated
RIFCSPLOWO2_12_FULL_Methylomirabilis_71_19_rifcsplowo2_12_scaffold_6392_20
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(20610..21326)
DNA (717bp) protein (239aa)
Putative uncharacterized protein id=4283035 bin=GWC2_Methylomirabilis_70_16 species=Rhodomicrobium vannielii genus=Rhodomicrobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hypothetical protein Tax=GWC2_Rokubacteria_70_16_curated
hypothetical protein
RIFCSPLOWO2_12_FULL_Methylomirabilis_71_19_rifcsplowo2_12_scaffold_6392_21
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

21548..23911
DNA (2364bp) protein (788aa)
transketolase; K00615 transketolase [EC:2.2.1.1] Tax=GWC2_Rokubacteria_70_16_curated
Transketolase domain protein id=4283033 bin=GWC2_Methylomirabilis_70_16 species=Desulfohalobium retbaense genus=Desulfohalobium taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
transketolase
RIFCSPLOWO2_12_FULL_Methylomirabilis_71_19_rifcsplowo2_12_scaffold_6392_22
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

24111..25421
DNA (1311bp) protein (437aa)
Diguanylate cyclase id=4283030 bin=GWC2_Methylomirabilis_70_16 species=Ferrimonas balearica genus=Ferrimonas taxon_order=Alteromonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
diguanylate cyclase Tax=GWC2_Rokubacteria_70_16_curated
diguanylate cyclase
RIFCSPLOWO2_12_FULL_Methylomirabilis_71_19_rifcsplowo2_12_scaffold_6392_23
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

25418..25807
DNA (390bp) protein (130aa)
id=4283029 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
id=4283029 Tax=GWC2_Rokubacteria_70_16_curated
RIFCSPLOWO2_12_FULL_Methylomirabilis_71_19_rifcsplowo2_12_scaffold_6392_24
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

26462..27412
DNA (951bp) protein (317aa)
Putative uncharacterized protein id=4283024 bin=GWC2_Methylomirabilis_70_16 species=Bradyrhizobium japonicum genus=Bradyrhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hypothetical protein Tax=GWC2_Rokubacteria_70_16_curated
hypothetical protein
RIFCSPLOWO2_12_FULL_Methylomirabilis_71_19_rifcsplowo2_12_scaffold_6392_25
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(27464..29974)
DNA (2511bp) protein (837aa)
glgP; glycogen phosphorylase (EC:2.4.1.1); K00688 starch phosphorylase [EC:2.4.1.1] Tax=GWC2_Rokubacteria_70_16_curated
Phosphorylase id=4283022 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=TA06 tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
glgP; glycogen phosphorylase
RIFCSPLOWO2_12_FULL_Methylomirabilis_71_19_rifcsplowo2_12_scaffold_6392_26
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(30094..30297)
DNA (204bp) protein (68aa)
30S ribosomal protein S21 1 id=4283020 bin=GWC2_Methylomirabilis_70_16 species=Nitrospina gracilis genus=Nitrospina taxon_order=Nitrospinales taxon_class=Nitrospinia phylum=Nitrospinae tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
rpsU-1; 30S ribosomal protein S21; K02970 small subunit ribosomal protein S21 Tax=GWC2_Rokubacteria_70_16_curated
rpsU-1; 30S ribosomal protein S21
RIFCSPLOWO2_12_FULL_Methylomirabilis_71_19_rifcsplowo2_12_scaffold_6392_27
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(30298..30513)
DNA (216bp) protein (72aa)
id=4283019 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
id=4283019 Tax=GWC2_Rokubacteria_70_16_curated
RIFCSPLOWO2_12_FULL_Methylomirabilis_71_19_rifcsplowo2_12_scaffold_6392_28
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(30527..30820)
DNA (294bp) protein (98aa)
RNP-1 like RNA-binding protein id=4283016 bin=GWC2_Methylomirabilis_70_16 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
RNP-1 like RNA-binding protein Tax=GWC2_Rokubacteria_70_16_curated
RNP-1 like RNA-binding protein
RIFCSPLOWO2_12_FULL_Methylomirabilis_71_19_rifcsplowo2_12_scaffold_6392_29
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(31089..32153)
DNA (1065bp) protein (355aa)
Putative uncharacterized protein id=4282852 bin=GWC2_Methylomirabilis_70_16 species=Natrialba asiatica genus=Natrialba taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hypothetical protein Tax=GWC2_Rokubacteria_70_16_curated
hypothetical protein
RIFCSPLOWO2_12_FULL_Methylomirabilis_71_19_rifcsplowo2_12_scaffold_6392_30
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(32173..32385)
DNA (213bp) protein (71aa)
id=4282851 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
id=4282851 Tax=GWC2_Rokubacteria_70_16_curated
Displaying items 1-30 of 32 in total

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