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RIFCSPLOWO2_12_FULL_NC10_sister_69_21_rifcsplowo2_12_scaffold_27059

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPLOWO2_12_FULL_NC10_sister_69_21_rifcsplowo2_12_scaffold_27059_1
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(50..820)
DNA (771bp) protein (257aa)
ABC transporter; K01995 branched-chain amino acid transport system ATP-binding protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
ABC transporter; K01995 branched-chain amino acid transport system ATP-binding protein id=14626693 bin=bin7_NC10_sister species=Starkeya novella genus=Starkeya taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
ABC transporter
RIFCSPLOWO2_12_FULL_NC10_sister_69_21_rifcsplowo2_12_scaffold_27059_2
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(909..1781)
DNA (873bp) protein (291aa)
inner-membrane translocator; K01998 branched-chain amino acid transport system permease protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
inner-membrane translocator; K01998 branched-chain amino acid transport system permease protein id=14626692 bin=bin7_NC10_sister species=Starkeya novella genus=Starkeya taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
inner-membrane translocator
RIFCSPLOWO2_12_FULL_NC10_sister_69_21_rifcsplowo2_12_scaffold_27059_3
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(1989..2888)
DNA (900bp) protein (300aa)
inner-membrane translocator; K01997 branched-chain amino acid transport system permease protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
inner-membrane translocator; K01997 branched-chain amino acid transport system permease protein id=14626691 bin=bin7_NC10_sister species=Starkeya novella genus=Starkeya taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
inner-membrane translocator
RIFCSPLOWO2_12_FULL_NC10_sister_69_21_rifcsplowo2_12_scaffold_27059_4
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(2929..4221)
DNA (1293bp) protein (431aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
ABC transporter substrate-binding protein, branched-chain amino acid transport system; K01999 branched-chain amino acid transport system substrate-binding protein id=14626690 bin=bin7_NC10_sister species=Afipia felis genus=Afipia taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
RIFCSPLOWO2_12_FULL_NC10_sister_69_21_rifcsplowo2_12_scaffold_27059_5
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(4245..5276)
DNA (1032bp) protein (344aa)
AMP-dependent synthetase and ligase; K02182 crotonobetaine/carnitine-CoA ligase [EC:6.2.1.-] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
Putative crotonobetaine/carnitine-CoA ligase id=4923973 bin=GWC2_Methylomirabilis_70_16 species=Bacillus azotoformans genus=Bacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
AMP-dependent synthetase and ligase
RIFCSPLOWO2_12_FULL_NC10_sister_69_21_rifcsplowo2_12_scaffold_27059_6
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(5331..5795)
DNA (465bp) protein (155aa)
AMP-dependent synthetase and ligase; K02182 crotonobetaine/carnitine-CoA ligase [EC:6.2.1.-] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
long-chain-fatty-acid--CoA ligase (EC:6.2.1.3)
Putative crotonobetaine/carnitine-CoA ligase id=4923973 bin=GWC2_Methylomirabilis_70_16 species=Bacillus azotoformans genus=Bacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
RIFCSPLOWO2_12_FULL_NC10_sister_69_21_rifcsplowo2_12_scaffold_27059_7
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(5792..6550)
DNA (759bp) protein (253aa)
enoyl-CoA hydratase/carnithine racemase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
3-hydroxybutyryl-CoA dehydratase id=3963825 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Porphyromonas taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
enoyl-CoA hydratase
RIFCSPLOWO2_12_FULL_NC10_sister_69_21_rifcsplowo2_12_scaffold_27059_8
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(6547..7584)
DNA (1038bp) protein (346aa)
methionine synthase, vitamin-B12 independent; K00549 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
Methionine synthase (B12-independent) id=4923975 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=Roseiflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
methionine synthase, vitamin-B12 independent
RIFCSPLOWO2_12_FULL_NC10_sister_69_21_rifcsplowo2_12_scaffold_27059_9
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(7587..7775)
DNA (189bp) protein (63aa)
FAD-dependent oxidoreductase n=1 Tax=Kribbella catacumbae RepID=UPI00036DEEF4
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
FAD dependent oxidoreductase
Displaying 9 items

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