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PLM4_32_b1_sep16_scaffold_1816

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_32_b1_sep16_scaffold_1816_1
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

comp(2..277)
DNA (276bp) protein (92aa)
Gluconate 2-dehydrogenase Tax=Bradyrhizobium sp. DFCI-1 RepID=U1IE45_9BRAD
2-ketogluconate reductase
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
PLM4_32_b1_sep16_scaffold_1816_2
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

390..1184
DNA (795bp) protein (265aa)
UPI0003D60502 related cluster Tax=unknown RepID=UPI0003D60502
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
PLM4_32_b1_sep16_scaffold_1816_3
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

1231..1509
DNA (279bp) protein (93aa)
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
PLM4_32_b1_sep16_scaffold_1816_4
unknown

Not on your lists

comp(1506..1901)
DNA (396bp) protein (132aa)

This feature has no annotations

PLM4_32_b1_sep16_scaffold_1816_5
unknown

Not on your lists

comp(1982..2095)
DNA (114bp) protein (38aa)

This feature has no annotations

PLM4_32_b1_sep16_scaffold_1816_6
unknown

Not on your lists

2291..2476
DNA (186bp) protein (62aa)

This feature has no annotations

PLM4_32_b1_sep16_scaffold_1816_7
RBG_13_Acidobacteria_68_16_curated, Acidobacteria, Bacteria

Not on your lists

2577..2930
DNA (354bp) protein (118aa)
Tax=RBG_13_Acidobacteria_68_16_curated
PLM4_32_b1_sep16_scaffold_1816_8
unknown

Not on your lists

2947..3375
DNA (429bp) protein (143aa)

This feature has no annotations

PLM4_32_b1_sep16_scaffold_1816_9
RBG_19FT_COMBO_Armatimonadetes_69_19_curated, Armatimonadetes, Bacteria

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comp(3451..4263)
DNA (813bp) protein (271aa)
dehydrogenase bin=RBG_19FT_COMBO_GAL15_69_19 species=Deinococcus peraridilitoris genus=Deinococcus taxon_order=Deinococcales taxon_class=Deinococci phylum=Deinococcus-Thermus tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
short-chain dehydrogenase
Tax=RBG_19FT_COMBO_Armatimonadetes_69_19_curated
PLM4_32_b1_sep16_scaffold_1816_10
RBG_16_Armatimonadetes_67_12_curated, Armatimonadetes, Bacteria

Not on your lists

comp(4263..4493)
DNA (231bp) protein (77aa)
Binding-protein-dependent transport systems inner membrane component bin=GWC2_Methylomirabilis_70_24 species=Thermotoga lettingae genus=Thermotoga taxon_order=Thermotogales taxon_class=Thermotogae phylum=Thermotogae tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
putative ABC transporter permease protein
Tax=RBG_16_Armatimonadetes_67_12_curated
PLM4_32_b1_sep16_scaffold_1816_11
unknown

Not on your lists

4950..5075
DNA (126bp) protein (42aa)

This feature has no annotations

PLM4_32_b1_sep16_scaffold_1816_12
RBG_16_Armatimonadetes_67_12_curated, Armatimonadetes, Bacteria

Not on your lists

comp(5072..5995)
DNA (924bp) protein (308aa)
UPI000346790B related cluster Tax=unknown RepID=UPI000346790B
ABC-type dipeptide/oligopeptide/nickel transport system, permease component
Tax=RBG_16_Armatimonadetes_67_12_curated
PLM4_32_b1_sep16_scaffold_1816_13
RBG_16_Armatimonadetes_67_12_curated, Armatimonadetes, Bacteria

Not on your lists

comp(6006..7556)
DNA (1551bp) protein (517aa)
Extracellular solute-binding protein family 5 Tax=Halanaerobium hydrogeniformans RepID=E4RII3_HALHG
family 5 extracellular solute-binding protein
Tax=RBG_16_Armatimonadetes_67_12_curated
PLM4_32_b1_sep16_scaffold_1816_14
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

comp(7553..9316)
DNA (1764bp) protein (588aa)
Peptidase M28 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C8L9_SPHTD
peptidase M28
Peptidase M28 {ECO:0000313|EMBL:ACZ40162.1}; species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Sphaerobacter.;" source="Sphaerobacter thermophilus (strain DSM 20745 / S 6022).;"
PLM4_32_b1_sep16_scaffold_1816_15
RBG_19FT_COMBO_Armatimonadetes_69_19_curated, Armatimonadetes, Bacteria

Not on your lists

comp(9313..10344)
DNA (1032bp) protein (344aa)
2-dehydropantoate 2-reductase bin=RBG_19FT_COMBO_GAL15_69_19 species=Roseobacter sp. GAI101 genus=Roseobacter taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
2-dehydropantoate 2-reductase
Tax=RBG_19FT_COMBO_Armatimonadetes_69_19_curated
PLM4_32_b1_sep16_scaffold_1816_16
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(10403..11107)
DNA (705bp) protein (235aa)
Putative uncharacterized protein bin=GWC2_Methylomirabilis_70_16 species=Chthoniobacter flavus genus=Chthoniobacter taxon_order=unknown taxon_class=Spartobacteria phylum=Verrucomicrobia tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Tax=GWC2_Rokubacteria_70_16_curated
PLM4_32_b1_sep16_scaffold_1816_17
RBG_19FT_COMBO_Nitrospirae_58_9_curated, Nitrospirae, Bacteria

Not on your lists

11128..13509
DNA (2382bp) protein (794aa)
Putative uncharacterized protein bin=GWB2_Nitrospirae_rel_47_37 species=Singulisphaera acidiphila genus=Singulisphaera taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWB2_Nitrospirae_rel_47_37 organism_group=Nitrospirae organism_desc=Good + (but may not be Nitrospirae phylum)
hypothetical protein
Tax=RBG_19FT_COMBO_Nitrospirae_58_9_curated
PLM4_32_b1_sep16_scaffold_1816_18
Anaeromyxobacter sp. Fw109-5, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13499..15112)
DNA (1614bp) protein (538aa)
FAD dependent oxidoreductase Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HG29_ANADF
FAD dependent oxidoreductase
FAD dependent oxidoreductase {ECO:0000313|EMBL:ABS27675.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" source="Anaeromyxobacter sp. (strain Fw109-5).;"
PLM4_32_b1_sep16_scaffold_1816_19
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

comp(15109..15417)
DNA (309bp) protein (103aa)
hypothetical protein; K01989 putative ABC transport system substrate-binding protein bin=bin7_NC10_sister species=Bradyrhizobium japonicum genus=Bradyrhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
Tax=CSP1_6_Rokubacteria
Displaying 19 items

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