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PLM4_32_b1_sep16_scaffold_1922

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_32_b1_sep16_scaffold_1922_1
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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1..570
DNA (570bp) protein (190aa)
Transcriptional regulator, TetR family bin=GWC2_Methylomirabilis_70_24 species=Syntrophobacter fumaroxidans genus=Syntrophobacter taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
TetR family transcriptional regulator
Tax=GWA2_Rokubacteria_70_23_curated
PLM4_32_b1_sep16_scaffold_1922_2
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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597..1370
DNA (774bp) protein (258aa)
Enoyl-CoA hydratase/isomerase bin=GWC2_Methylomirabilis_70_24 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
Enoyl-CoA hydratase/isomerase
Tax=GWA2_Rokubacteria_70_23_curated
PLM4_32_b1_sep16_scaffold_1922_3
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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1373..2122
DNA (750bp) protein (250aa)
dehydrogenase/reductase 11 (EC:1.1.1.-)
Probable oxidoreductase (Short-chain dehydrogenase family) bin=GWF2_Methylomirabilis_70_14 species=unknown genus=Natrialba taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=GWA2_Rokubacteria_70_23_curated
PLM4_32_b1_sep16_scaffold_1922_4
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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2153..2473
DNA (321bp) protein (107aa)
Putative sterol carrier protein bin=GWC2_Methylomirabilis_70_24 species=Desulfomonile tiedjei genus=Desulfomonile taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
putative sterol carrier protein
Tax=GWA2_Rokubacteria_70_23_curated
PLM4_32_b1_sep16_scaffold_1922_5
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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2616..3716
DNA (1101bp) protein (367aa)
Poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit bin=GWC2_Methylomirabilis_70_16 species=Bacillus sp. 1NLA3E genus=Bacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
poly(R)-hydroxyalkanoic acid synthase subunit PhaC
Tax=GWC2_Rokubacteria_70_16_curated
PLM4_32_b1_sep16_scaffold_1922_6
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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3745..4302
DNA (558bp) protein (186aa)
Putative uncharacterized protein bin=GWC2_Methylomirabilis_70_24 species=unknown genus=Roseiflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
hypothetical protein
Tax=GWA2_Rokubacteria_70_23_curated
PLM4_32_b1_sep16_scaffold_1922_7
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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4299..4880
DNA (582bp) protein (194aa)
MaoC domain protein dehydratase bin=GWC2_Methylomirabilis_70_24 species=Anaerococcus prevotii genus=Anaerococcus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
acyl dehydratase
Tax=GWA2_Rokubacteria_70_23_curated
PLM4_32_b1_sep16_scaffold_1922_8
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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4948..5448
DNA (501bp) protein (167aa)
Uncharacterized protein conserved in bacteria bin=GWC2_Methylomirabilis_70_16 species=Cystobacter fuscus genus=Cystobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
putative transcriptional regulator
Tax=GWC2_Rokubacteria_70_16_curated
PLM4_32_b1_sep16_scaffold_1922_9
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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comp(5493..5957)
DNA (465bp) protein (155aa)
id=4320160 bin=GWC2_Methylomirabilis_70_24 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
Tax=GWA2_Rokubacteria_70_23_curated
PLM4_32_b1_sep16_scaffold_1922_10
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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6108..7613
DNA (1506bp) protein (502aa)
lcfA5; long chain acyl-CoA synthetase (EC:6.2.1.3)
AMP-dependent synthetase and ligase bin=GWC2_Methylomirabilis_70_16 species=Bacillus coagulans genus=Bacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Tax=GWC2_Rokubacteria_70_16_curated
PLM4_32_b1_sep16_scaffold_1922_11
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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7624..8316
DNA (693bp) protein (231aa)
AMP-dependent synthetase and ligase bin=GWC2_Methylomirabilis_70_16 species=Caldithrix abyssi genus=Caldithrix taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
putative acyl-CoA ligase
Tax=GWC2_Rokubacteria_70_16_curated
Displaying 11 items

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