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PLM4_32_b1_sep16_scaffold_4701

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_32_b1_sep16_scaffold_4701_1
Syntrophus aciditrophicus, Syntrophus, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(3..1919)
DNA (1917bp) protein (639aa)
Membrane carboxypeptidase Tax=Syntrophus aciditrophicus (strain SB) RepID=Q2LY60_SYNAS
membrane carboxypeptidase
Membrane carboxypeptidase {ECO:0000313|EMBL:ABC79017.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Syntrophobacterales; Syntrophaceae; Syntrophus.;" source="Syntrophus aciditrophicus (strain SB).;"
PLM4_32_b1_sep16_scaffold_4701_2
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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comp(2082..3542)
DNA (1461bp) protein (487aa)
Amidase bin=GWA2_Methylomirabilis_73_35 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Amidase
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM4_32_b1_sep16_scaffold_4701_3
unknown

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3750..4100
DNA (351bp) protein (117aa)

This feature has no annotations

PLM4_32_b1_sep16_scaffold_4701_4
CSP1_8_Deltaproteobacteria, 43F-1404R, Deltaproteobacteria, Proteobacteria, Bacteria

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4100..4495
DNA (396bp) protein (132aa)
PAS/PAC sensor hybrid histidine kinase (EC:2.7.3.-)
PAS/PAC sensor hybrid histidine kinase bin=bin5_DeltaP species=Zavarzinella formosa genus=Zavarzinella taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=bin5_DeltaP organism_group=Deltaproteobacteria
Tax=CSP1_8_Deltaproteobacteria
PLM4_32_b1_sep16_scaffold_4701_5
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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4559..5629
DNA (1071bp) protein (357aa)
Patatin bin=GWF2_Methylomirabilis_70_14 species=Leptonema illini genus=Leptonema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
patatin
Tax=GWA2_Rokubacteria_70_23_curated
PLM4_32_b1_sep16_scaffold_4701_6
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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comp(5458..6042)
DNA (585bp) protein (195aa)
peptidoglycan-associated (lipo)protein-like protein; K03640 peptidoglycan-associated lipoprotein bin=bin7_NC10_sister species=Chlorobium chlorochromatii genus=Chlorobium taxon_order=Chlorobiales taxon_class=Chlorobia phylum=Chlorobi tax=bin7_NC10_sister organism_group=NC10
peptidoglycan-associated (lipo)protein-like protein
Tax=GWA2_Rokubacteria_70_23_curated
PLM4_32_b1_sep16_scaffold_4701_7
unknown

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comp(6056..6277)
DNA (222bp) protein (74aa)

This feature has no annotations

PLM4_32_b1_sep16_scaffold_4701_8
R_Rokubacteria_68_19, Rokubacteria, Bacteria

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comp(6557..7057)
DNA (501bp) protein (167aa)
hypothetical protein bin=bin7_NC10_sister species=Amycolatopsis decaplanina genus=Amycolatopsis taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin7_NC10_sister organism_group=NC10
NUDIX hydrolase
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
PLM4_32_b1_sep16_scaffold_4701_9
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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comp(7088..7465)
DNA (378bp) protein (126aa)
ACT domain-containing protein bin=GWF2_Methylomirabilis_70_14 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
acT domain-containing protein
Tax=GWA2_Rokubacteria_70_23_curated
PLM4_32_b1_sep16_scaffold_4701_10
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

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comp(7414..7911)
DNA (498bp) protein (166aa)
id=14626526 bin=bin7_NC10_sister tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
Tax=CSP1_6_Rokubacteria
PLM4_32_b1_sep16_scaffold_4701_11
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

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comp(8036..9082)
DNA (1047bp) protein (349aa)
hypothetical protein bin=bin7_NC10_sister species=Microscilla marina genus=Microscilla taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
Tax=CSP1_6_Rokubacteria
PLM4_32_b1_sep16_scaffold_4701_12
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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9213..10187
DNA (975bp) protein (325aa)
Import inner membrane translocase, subunit Tim44 bin=GWC2_Methylomirabilis_70_16 species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
import inner membrane translocase subunit Tim44
Tax=GWC2_Rokubacteria_70_16_curated
PLM4_32_b1_sep16_scaffold_4701_13
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria

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comp(10213..10464)
DNA (252bp) protein (84aa)
hypothetical protein Tax=alpha proteobacterium SCGC AAA015-N04 RepID=UPI000368B764
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
Displaying 13 items

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