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PLM4_32_b1_sep16_scaffold_3957

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_32_b1_sep16_scaffold_3957_1
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

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2..850
DNA (849bp) protein (283aa)
hypothetical protein SpalD1_28839 bin=GWC2_Syntrophus__56_31 species=unidentified genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Syntrophus__56_31 organism_group=Deltaproteobacteria organism_desc=Good +
NHL repeat family protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
PLM4_32_b1_sep16_scaffold_3957_2
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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866..2437
DNA (1572bp) protein (524aa)
ABC transporter periplasmic protein bin=GWC2_Methylomirabilis_70_16 species=Bacillus azotoformans genus=Bacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
ABC transporter periplasmic protein
Tax=GWC2_Rokubacteria_70_16_curated
PLM4_32_b1_sep16_scaffold_3957_3
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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2459..3409
DNA (951bp) protein (317aa)
Binding-protein-dependent transport systems inner membrane component bin=GWC2_Methylomirabilis_70_16 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
binding-protein-dependent transport system inner membrane protein
Tax=GWC2_Rokubacteria_70_16_curated
PLM4_32_b1_sep16_scaffold_3957_4
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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3402..4238
DNA (837bp) protein (279aa)
Binding-protein-dependent transport systems inner membrane component bin=GWC2_Methylomirabilis_70_16 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
binding-protein-dependent transport systems inner membrane component
Tax=GWA2_Rokubacteria_70_23_curated
PLM4_32_b1_sep16_scaffold_3957_5
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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4241..4726
DNA (486bp) protein (162aa)
hypothetical protein SclubJA_10064 bin=GWC2_Methylomirabilis_70_16 species=SAR324 cluster bacterium JCVI-SC AAA005 genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Tax=GWC2_Rokubacteria_70_16_curated
PLM4_32_b1_sep16_scaffold_3957_6
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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4727..5104
DNA (378bp) protein (126aa)
Hypothetical membrane protein Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AA92_GEMAT
hypothetical membrane protein
Hypothetical membrane protein {ECO:0000313|EMBL:BAH39690.1}; species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC; 100505).;"
PLM4_32_b1_sep16_scaffold_3957_7
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(5099..5518)
DNA (420bp) protein (140aa)
Uncharacterized protein Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CK41_PSEUX
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
PLM4_32_b1_sep16_scaffold_3957_8
Ponticoccus sp. UMTAT08, Ponticoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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5901..6521
DNA (621bp) protein (207aa)
Fatty acid desaturase family protein Tax=Sagittula stellata E-37 RepID=A3K2H2_9RHOB
Fatty acid desaturase {ECO:0000313|EMBL:KHQ50567.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Ponticoccus.;" source="Ponticoccus sp. UMTAT08.;"
hypothetical protein
PLM4_32_b1_sep16_scaffold_3957_9
unknown

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comp(6526..6717)
DNA (192bp) protein (64aa)

This feature has no annotations

PLM4_32_b1_sep16_scaffold_3957_10
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

6749..7651
DNA (903bp) protein (301aa)
3-hydroxyisobutyrate dehydrogenase bin=GWC2_Methylomirabilis_70_24 species=Tepidanaerobacter acetatoxydans genus=Tepidanaerobacter taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
3-hydroxyisobutyrate dehydrogenase
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
PLM4_32_b1_sep16_scaffold_3957_11
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(7648..8343)
DNA (696bp) protein (232aa)
Ferredoxin bin=GWC2_Methylomirabilis_70_24 species=Candidatus Chloracidobacterium thermophilum genus=Candidatus Chloracidobacterium taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
ferredoxin
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
PLM4_32_b1_sep16_scaffold_3957_12
Methylibium sp. T29-B, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8362..9399)
DNA (1038bp) protein (346aa)
Ferredoxin--NAD(P)(+) reductase CarAd {ECO:0000313|EMBL:EWS61188.1}; EC=1.18.1.2 {ECO:0000313|EMBL:EWS61188.1};; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium sp. T29-B.;"
hypothetical protein Tax=Thiobacillus denitrificans RepID=UPI0003680498
msmD; methanesulfonate monooxygenase component; reductase
PLM4_32_b1_sep16_scaffold_3957_13
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9396..10562)
DNA (1167bp) protein (389aa)
hypothetical protein Tax=SAR202 cluster bacterium SCGC AAA240-N13 RepID=UPI00037BFE47
Uncharacterized protein {ECO:0000313|EMBL:ETW95121.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
hypothetical protein
PLM4_32_b1_sep16_scaffold_3957_14
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10585..10707)
DNA (123bp) protein (41aa)
amidohydrolase 2 bin=GWF2_Methylomirabilis_70_14 species=unidentified genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
PLM4_32_b1_sep16_scaffold_3957_15
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10680..11393)
DNA (714bp) protein (238aa)
Uncharacterized protein {ECO:0000313|EMBL:ETX04625.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
amidohydrolase 2 bin=GWF2_Methylomirabilis_70_14 species=unidentified genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
amidohydrolase 2
PLM4_32_b1_sep16_scaffold_3957_16
Hyalangium minutum, Hyalangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11617..12525
DNA (909bp) protein (303aa)
Tryptophanyl-tRNA synthetase Tax=Deinococcus geothermalis (strain DSM 11300) RepID=Q1J181_DEIGD
Tryptophanyl-tRNA synthetase {ECO:0000313|EMBL:KFE70110.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Hyalangium.;" source="Hyalangium minutum.;"
tryptophanyl-tRNA synthetase II
Displaying 16 items

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