ggKbase home page

PLM4_32_b1_sep16_scaffold_8646_6

Organism: PLM4_32_b1_sep16_Rokubacteria_71_14

near complete RP 50 / 55 MC: 2 BSCG 48 / 51 MC: 1 ASCG 13 / 38 MC: 2
Location: 4749..5294

Top 3 Functional Annotations

Value Algorithm Source
proteophosphoglycan ppg4 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin similarity UNIREF
DB: UNIREF100
  • Identity: 35.6
  • Coverage: 177.0
  • Bit_score: 71
  • Evalue 8.10e-10
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 63.8
  • Coverage: 69.0
  • Bit_score: 90
  • Evalue 2.40e-15

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

R_Rokubacteria_71_18 → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 546
ATGCCGGCGCAGGCGCCGCAGGTGGGCTCGGAGATCGTGGCGCCCGCCGCGAGCAGGGTCGCGAGCAGCCCCTCGCGCGCCATCACCTCGAGGATGCGGTGGCTGCCCGGGAAGACCACGAAGGAGACCGACGGCGCCACCGTCCGGCCCTCGAGCACGCGGGTCACCGCCTGCATGTCCTCCCACGAGGAATTGGTGCAGGAGCCGACCATGACCTGCTCGATCTCCAGCCCCTCGACCTCGGACACCGGGACCACGCGGTCCGGCGACCCGGGCATCGCGACCAGCGGCTCGAGGCTCGAGAGATCCAGCTCGATCCGGTCGTCGTACTCCGCGTCGGCATCCGGGGCCAGCGGCCGCCAGTCCGCCTCGCGTCCGAGGAGCCGGAAGTACTCGCGGGTCGCCTCGTCCGACGGGAACACGCTGGTGGTGAGCGTCAGCTCGGCGCCCATGTTGCAGATGGTGGCCCGCTGGGGCAGGGACAGCGTCGCCGCACCGGGACCGCCATACTCGAAGATGCGGCCGCTGCCTCCGCGCACCGAGTAG
PROTEIN sequence
Length: 182
MPAQAPQVGSEIVAPAASRVASSPSRAITSRMRWLPGKTTKETDGATVRPSSTRVTACMSSHEELVQEPTMTCSISSPSTSDTGTTRSGDPGIATSGSRLERSSSIRSSYSASASGASGRQSASRPRSRKYSRVASSDGNTLVVSVSSAPMLQMVARWGRDSVAAPGPPYSKMRPLPPRTE*