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PLM4_32_b1_sep16_scaffold_8646

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_32_b1_sep16_scaffold_8646_1
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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comp(2..892)
DNA (891bp) protein (297aa)
Methionine synthase (B12-independent) bin=GWC2_Methylomirabilis_70_16 species=unknown genus=Roseiflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
vitamin-B12 independent methionine synthase
Tax=GWC2_Rokubacteria_70_16_curated
PLM4_32_b1_sep16_scaffold_8646_2
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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comp(920..1651)
DNA (732bp) protein (244aa)
3-hydroxybutyryl-CoA dehydratase (EC:4.2.1.55)
3-hydroxybutyryl-CoA dehydratase bin=GWC2_Methylomirabilis_70_16 species=Porphyromonas endodontalis genus=Porphyromonas taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Tax=GWC2_Rokubacteria_70_16_curated
PLM4_32_b1_sep16_scaffold_8646_3
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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comp(1648..2802)
DNA (1155bp) protein (385aa)
Acyl-CoA dehydrogenase bin=GWF2_Methylomirabilis_70_14 species=uncultured candidate division OP1 bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
acyl-CoA dehydrogenase domain-containing protein
Tax=GWC2_Rokubacteria_70_16_curated
PLM4_32_b1_sep16_scaffold_8646_4
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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comp(2839..3936)
DNA (1098bp) protein (366aa)
AcnD-accessory protein PrpF bin=GWF2_Methylomirabilis_70_14 species=uncultured prokaryote genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
PrpF family protein
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM4_32_b1_sep16_scaffold_8646_5
R_Rokubacteria_68_19, Rokubacteria, Bacteria

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comp(3961..4557)
DNA (597bp) protein (199aa)
aconitate hydratase (EC:4.2.1.3)
Aconitate hydratase bin=GWF2_Methylomirabilis_70_14 species=Gloeobacter violaceus genus=Gloeobacter taxon_order=Gloeobacterales taxon_class=Gloeobacteria phylum=Cyanobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
PLM4_32_b1_sep16_scaffold_8646_6
R_Rokubacteria_71_18, Rokubacteria, Bacteria

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4749..5294
DNA (546bp) protein (182aa)
proteophosphoglycan ppg4 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
PLM4_32_b1_sep16_scaffold_8646_7
RBG_16_Desulfobacca_58_9_curated, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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5439..5600
DNA (162bp) protein (54aa)
Tax=RBG_16_Desulfobacca_58_9_curated
PLM4_32_b1_sep16_scaffold_8646_8
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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comp(5841..6971)
DNA (1131bp) protein (377aa)
citrate synthase (EC:2.3.3.1)
Citrate synthase bin=GWC2_Methylomirabilis_70_24 species=unknown genus=Thermaerobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM4_32_b1_sep16_scaffold_8646_9
Sulfuricella denitrificans, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

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7162..8415
DNA (1254bp) protein (418aa)
EAL domain-containing protein Tax=Sulfuricella denitrificans skB26 RepID=S6B0V0_9PROT
EAL domain-containing protein
EAL domain-containing protein {ECO:0000313|EMBL:BAN34312.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella denitrificans skB26.;"
Displaying 9 items

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