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PLM4_65_coex_sep16_scaffold_17272

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_coex_sep16_scaffold_17272_1
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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comp(3..200)
DNA (198bp) protein (66aa)
Putative uncharacterized protein bin=GWC2_Methylomirabilis_70_24 species=Geitlerinema sp. PCC 7407 genus=Geitlerinema taxon_order=Oscillatoriales taxon_class=unknown phylum=Cyanobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
Tax=GWA2_Rokubacteria_70_23_curated
PLM4_65_coex_sep16_scaffold_17272_2
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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comp(197..916)
DNA (720bp) protein (240aa)
Vitamin B12 dependent methionine synthase bin=GWA2_Methylomirabilis_73_35 species=Desulfomonile tiedjei genus=Desulfomonile taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Vitamin B12 dependent methionine synthase activation region
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM4_65_coex_sep16_scaffold_17272_3
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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comp(913..1830)
DNA (918bp) protein (306aa)
Homocysteine S-methyltransferase bin=GWA2_Methylomirabilis_73_35 species=Caldithrix abyssi genus=Caldithrix taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
Tax=GWA2_Rokubacteria_73_35_curated
PLM4_65_coex_sep16_scaffold_17272_4
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(1827..2498)
DNA (672bp) protein (224aa)
methyltransferase cognate corrinoid protein bin=bin7_NC10_sister species=Mahella australiensis genus=Mahella taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=bin7_NC10_sister organism_group=NC10
methyltransferase cognate corrinoid protein
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM4_65_coex_sep16_scaffold_17272_5
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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comp(2562..3629)
DNA (1068bp) protein (356aa)
Putative transmembrane sensor domain protein bin=GWA2_Methylomirabilis_73_35 species=Desulfovibrio magneticus genus=Desulfovibrio taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
adenylate/guanylate cyclase with Chase sensor
Tax=GWA2_Rokubacteria_73_35_curated
PLM4_65_coex_sep16_scaffold_17272_6
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

3690..4460
DNA (771bp) protein (257aa)
Putative beta-lactamase-like protein bin=GWA2_Methylomirabilis_73_35 species=Bacteriovorax marinus genus=Bacteriovorax taxon_order=Bdellovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
beta-lactamase superfamily metal-dependent hydrolase
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM4_65_coex_sep16_scaffold_17272_7
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(4448..5551)
DNA (1104bp) protein (368aa)
potA2; spermidine/putrescine import ATP-binding protein PotA (EC:3.6.3.31)
ABC transporter-like protein; K02052 putative spermidine/putrescine transport system ATP-binding protein bin=bin7_NC10_sister species=Syntrophobacter fumaroxidans genus=Syntrophobacter taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
Tax=GWA2_Rokubacteria_73_35_curated
PLM4_65_coex_sep16_scaffold_17272_8
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(5548..5913)
DNA (366bp) protein (122aa)
major facilitator superfamily transporter bin=bin7_NC10_sister species=Advenella kashmirensis genus=Advenella taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Displaying 8 items

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