ggKbase home page

PLM4_65_coex_sep16_scaffold_907

Search features with annotation key words

Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_coex_sep16_scaffold_907_1
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

comp(782..1321)
DNA (540bp) protein (180aa)
Putative uncharacterized protein Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IJJ7_KORVE
DinB-like domain protein
Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
PLM4_65_coex_sep16_scaffold_907_2
RLO_Verrucomicrobia_64_8, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

comp(1401..2291)
DNA (891bp) protein (297aa)
Glycosyl transferase group 1 Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZU05_OPITP
group 1 glycosyl transferase
Tax=RIFCSPLOWO2_12_FULL_Verrucomicrobia_64_8_curated
PLM4_65_coex_sep16_scaffold_907_3
Opitutus terrae, Opitutus, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

comp(2279..2578)
DNA (300bp) protein (100aa)
Glycosyl transferase group 1 Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZU05_OPITP
group 1 glycosyl transferase
Glycosyl transferase group 1 {ECO:0000313|EMBL:ACB75887.1}; species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae; Opitutus.;" source="Opitutus terrae (strain DSM 11246 / PB90-1).;"
PLM4_65_coex_sep16_scaffold_907_4
Opitutus terrae, Opitutus, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

comp(2623..3405)
DNA (783bp) protein (261aa)
Uncharacterized protein Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZU07_OPITP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACB75889.1}; species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae; Opitutus.;" source="Opitutus terrae (strain DSM 11246 / PB90-1).;"
PLM4_65_coex_sep16_scaffold_907_5
Opitutus terrae, Opitutus, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

comp(3402..5108)
DNA (1707bp) protein (569aa)
Na+/solute symporter Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZU08_OPITP
Na+/solute symporter
Na+/solute symporter {ECO:0000313|EMBL:ACB75890.1}; Flags: Precursor;; species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae; Opitutus.;" source="Opitutus terrae (strain DSM 11246 / PB90-1).;"
PLM4_65_coex_sep16_scaffold_907_6
Opitutus terrae, Opitutus, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

comp(5105..5257)
DNA (153bp) protein (51aa)
Uncharacterized protein Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZU09_OPITP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACB75891.1}; Flags: Precursor;; species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae; Opitutus.;" source="Opitutus terrae (strain DSM 11246 / PB90-1).;"
PLM4_65_coex_sep16_scaffold_907_7
Opitutus terrae, Opitutus, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

comp(5254..7803)
DNA (2550bp) protein (850aa)
LmbE family protein Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZU10_OPITP
LmbE family protein
LmbE family protein {ECO:0000313|EMBL:ACB75892.1}; Flags: Precursor;; species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae; Opitutus.;" source="Opitutus terrae (strain DSM 11246 / PB90-1).;"
PLM4_65_coex_sep16_scaffold_907_8
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

Not on your lists

7852..8124
DNA (273bp) protein (91aa)
Integron integrase bin=GWF2_Methylomirabilis_70_14 species=Desulfuromonas acetoxidans genus=Desulfuromonas taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBE69225.1}; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
PLM4_65_coex_sep16_scaffold_907_9
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8274..8804)
DNA (531bp) protein (177aa)
Universal stress protein Tax=planctomycete KSU-1 RepID=I3IP09_9PLAN
Uncharacterized protein {ECO:0000313|EMBL:ETX07011.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
universal stress protein UspA-like protein
PLM4_65_coex_sep16_scaffold_907_10
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

9052..9321
DNA (270bp) protein (90aa)
Putative transcriptional regulator, XRE family bin=GWA2_Methylomirabilis_73_35 species=Bifidobacterium longum genus=Bifidobacterium taxon_order=Bifidobacteriales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
putative transcriptional regulator
Tax=GWA2_Rokubacteria_73_35_curated
PLM4_65_coex_sep16_scaffold_907_11
Thermofilum sp. 1807-2, Thermofilum, Thermoproteales, Thermoprotei, Crenarchaeota, Archaea

Not on your lists

9390..10244
DNA (855bp) protein (285aa)
Uridine phosphorylase Tax=Thermofilum sp. 1910b RepID=S5ZA26_9CREN
Uridine phosphorylase {ECO:0000313|EMBL:AKG38507.1}; species="Archaea; Crenarchaeota; Thermoprotei; Thermoproteales; Thermofilaceae; Thermofilum.;" source="Thermofilum sp. 1807-2.;"
uridine phosphorylase
PLM4_65_coex_sep16_scaffold_907_12
Burkholderia sp. RPE67, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10241..11563
DNA (1323bp) protein (441aa)
invasion protein Tax=Streptomyces sp. FxanaD5 RepID=UPI000370DED9
FAD dependent oxidoreductase
FAD dependent oxidoreductase {ECO:0000313|EMBL:BAO89908.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. RPE67.;"
PLM4_65_coex_sep16_scaffold_907_13
Agrobacterium rhizogenes, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11587..12594
DNA (1008bp) protein (336aa)
hypothetical protein Tax=Chelatococcus sp. GW1 RepID=UPI000304F46F
Nitrate ABC transporter substrate-binding protein {ECO:0000313|EMBL:KEA07784.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium rhizogenes.;"
hypothetical protein
PLM4_65_coex_sep16_scaffold_907_14
R_NC10_66_22, NC10, Bacteria

Not on your lists

12569..13384
DNA (816bp) protein (272aa)
hypothetical protein Tax=Chelatococcus sp. GW1 RepID=UPI0002E93E8C
ABC transporter
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM4_65_coex_sep16_scaffold_907_15
Labrenzia sp. C1B10, Labrenzia, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13381..14139
DNA (759bp) protein (253aa)
ABC transporter permease Tax=Labrenzia RepID=U7G045_9RHOB
ABC transporter permease {ECO:0000313|EMBL:ERP90852.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Labrenzia.;" source="Labrenzia sp. C1B10.;"
binding-protein-dependent transport system inner membrane protein
PLM4_65_coex_sep16_scaffold_907_16
Methanothermobacter thermautotrophicus, Methanothermobacter, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

Not on your lists

14136..15434
DNA (1299bp) protein (433aa)
5'-deoxyadenosine deaminase {ECO:0000255|HAMAP-Rule:MF_01281}; Short=5'-dA deaminase {ECO:0000255|HAMAP-Rule:MF_01281};; EC=3.5.4.41 {ECO:0000255|HAMAP-Rule:MF_01281};; species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methanothermobacter.;" source="Methanothermobacter thermautotrophicus (strain ATCC 29096 / DSM 1053 /; JCM 10044 / NBRC 100330 / Delta H) (Methanobacterium; thermoautotrophicum).;"
5-methylthioadenosine/S-adenosylhomocysteine deaminase Tax=Methanothermobacter thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM 10044 / NBRC 100330 / Delta H) RepID=MTAD_METTH
N-ethylammeline chlorohydrolase
PLM4_65_coex_sep16_scaffold_907_17
GWC2_RIF_CHLX_73_18_curated, RIF-CHLX, Bacteria

Not on your lists

15421..16425
DNA (1005bp) protein (335aa)
Adenosine deaminase bin=GWC2_Chloroflexi_73_18 species=Thermobacillus composti genus=Thermobacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
hypothetical protein
Tax=GWC2_RIF_CHLX_73_18_curated
PLM4_65_coex_sep16_scaffold_907_18
GWC1_OP11_42_9, Woesebacteria, Microgenomates, Bacteria

Not on your lists

16435..17391
DNA (957bp) protein (319aa)
Uncharacterized protein {ECO:0000313|EMBL:KKS77492.1}; species="Bacteria; Microgenomates.;" source="Microgenomates (Woesebacteria) bacterium GW2011_GWC1_42_9.;"
PLM4_65_coex_sep16_scaffold_907_19
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17405..18052)
DNA (648bp) protein (216aa)
nitrate ABC transporter substrate-binding protein Tax=Pseudonocardia sp. P1 RepID=UPI0001FFE96D
Uncharacterized protein {ECO:0000313|EMBL:ETX00524.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components-like protein
PLM4_65_coex_sep16_scaffold_907_20
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18119..18340)
DNA (222bp) protein (74aa)
Uncharacterized protein {ECO:0000313|EMBL:ETX00523.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
PLM4_65_coex_sep16_scaffold_907_21
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(18392..18721)
DNA (330bp) protein (110aa)
Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen bin=GWA2_Methylomirabilis_73_35 species=Niastella koreensis genus=Niastella taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen
Tax=GWA2_Rokubacteria_73_35_curated
PLM4_65_coex_sep16_scaffold_907_22
R_NC10_66_22, NC10, Bacteria

Not on your lists

comp(18731..18940)
DNA (210bp) protein (70aa)
Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
alkyl hydroperoxide reductase
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM4_65_coex_sep16_scaffold_907_23
RBG_16_Chloroflexi_57_8_curated, Chloroflexi, Bacteria

Not on your lists

comp(19013..20647)
DNA (1635bp) protein (545aa)
Acyl-CoA reductase Tax=Desulfatibacillum alkenivorans (strain AK-01) RepID=B8F9B3_DESAA
acyl-CoA reductase
Tax=RBG_16_Chloroflexi_57_8_curated
PLM4_65_coex_sep16_scaffold_907_24
RBG_16_Chloroflexi_57_8_curated, Chloroflexi, Bacteria

Not on your lists

comp(20644..21969)
DNA (1326bp) protein (442aa)
Uncharacterized protein Tax=Desulfatibacillum alkenivorans (strain AK-01) RepID=B8F9B2_DESAA
hypothetical protein
Tax=RBG_16_Chloroflexi_57_8_curated
PLM4_65_coex_sep16_scaffold_907_25
Meiothermus ruber, Meiothermus, Thermales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

comp(22086..22457)
DNA (372bp) protein (124aa)
5-hydroxyisourate hydrolase {ECO:0000256|RuleBase:RU361270}; Short=HIU hydrolase {ECO:0000256|RuleBase:RU361270};; Short=HIUHase {ECO:0000256|RuleBase:RU361270};; EC=3.5.2.17 {ECO:0000256|RuleBase:RU361270};; species="Bacteria; Deinococcus-Thermus; Deinococci; Thermales; Thermaceae; Meiothermus.;" source="Meiothermus ruber (strain ATCC 35948 / DSM 1279 / VKM B-1258 / 21); (Thermus ruber).;"
5-hydroxyisourate hydrolase Tax=Meiothermus ruber (strain ATCC 35948 / DSM 1279 / VKM B-1258 / 21) RepID=D3PRR9_MEIRD
hydroxyisourate hydrolase
PLM4_65_coex_sep16_scaffold_907_26

Not on your lists

comp(22454..23068)
DNA (615bp) protein (205aa)
carbon monoxide dehydrogenase large chain (COdehydrogenase subunit L) (CO-DH L) (EC:1.2.99.2) bin=bin7_NC10_sister species=Thermomicrobium roseum genus=Thermomicrobium taxon_order=Thermomicrobiales taxon_class=Thermomicrobia phylum=Chloroflexi tax=bin7_NC10_sister organism_group=NC10
xanthine dehydrogenase, molybdenum binding subunit apoprotein (EC:1.17.1.4)
Carbon monoxide dehydrogenase form II large subunit {ECO:0000313|EMBL:AJP31592.1}; Flags: Fragment;; species="unclassified sequences; environmental samples.;" source="uncultured marine organism.;"
Displaying 26 items

View Taxonomy