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PLM4_65_coex_sep16_scaffold_10667

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_coex_sep16_scaffold_10667_1
unknown

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comp(2..472)
DNA (471bp) protein (157aa)

This feature has no annotations

PLM4_65_coex_sep16_scaffold_10667_2
CG_CPR05_01, CG_CPR05, Bacteria

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comp(469..933)
DNA (465bp) protein (155aa)
transmembrane_regions 5..27 bin=ACD22 species=ACD22 genus=ACD22 taxon_order=ACD22 taxon_class=ACD22 phylum=WWE3 tax=ACD22 organism_group=WWE3 organism_desc=WWE3
Tax=CG_CPR05_01
PLM4_65_coex_sep16_scaffold_10667_3
unknown

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1213..1359
DNA (147bp) protein (49aa)

This feature has no annotations

PLM4_65_coex_sep16_scaffold_10667_4
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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comp(1367..2104)
DNA (738bp) protein (246aa)
RNA polymerase sigma factor bin=GWA2_Methylomirabilis_73_35 species=Selenomonas noxia genus=Selenomonas taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
rpoD; RNA polymerase sigma factor RpoD
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM4_65_coex_sep16_scaffold_10667_5
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(2277..3107)
DNA (831bp) protein (277aa)
NlpD; membrane protein bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
peptidase M23
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM4_65_coex_sep16_scaffold_10667_6
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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comp(3104..3403)
DNA (300bp) protein (100aa)
Acylphosphatase bin=GWA2_Methylomirabilis_73_35 species=Rhodothermus marinus genus=Rhodothermus taxon_order=Bacteroidetes Order II. Incertae sedis taxon_class=unknown phylum=Bacteroidetes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
acylphosphatase
Tax=GWA2_Rokubacteria_73_35_curated
PLM4_65_coex_sep16_scaffold_10667_trna_1
unknown

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comp(3475..3548)
DNA (74bp)
transferRNA Pro
PLM4_65_coex_sep16_scaffold_10667_7
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(3579..4232)
DNA (654bp) protein (218aa)
protein-L-isoaspartate O-methyltransferase (EC:2.1.1.77)
Protein-L-isoaspartate O-methyltransferase 1 bin=GWA2_Methylomirabilis_73_35 species=Syntrophobacter fumaroxidans genus=Syntrophobacter taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM4_65_coex_sep16_scaffold_10667_8
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(4232..5023)
DNA (792bp) protein (264aa)
5'-nucleotidase SurE bin=GWA2_Methylomirabilis_73_35 species=Pelobacter carbinolicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
surE; 5'(3')-nucleotidase/polyphosphatase
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Displaying 9 items

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