ggKbase home page

PLM4_65_coex_sep16_scaffold_5100

Search features with annotation key words

Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_coex_sep16_scaffold_5100_1
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

1..957
DNA (957bp) protein (319aa)
ctaE; cytochrome c oxidase subunit III (EC:1.9.3.1)
Cytochrome c oxidase, subunit I bin=GWA2_Methylomirabilis_73_35 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM4_65_coex_sep16_scaffold_5100_2
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

954..1247
DNA (294bp) protein (98aa)
Putative uncharacterized protein bin=GWA2_Methylomirabilis_73_35 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
PLM4_65_coex_sep16_scaffold_5100_3
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

1252..2046
DNA (795bp) protein (265aa)
Putative CtaG protein bin=GWA2_Methylomirabilis_73_35 species=Gemmatimonas aurantiaca genus=Gemmatimonas taxon_order=Gemmatimonadales taxon_class=Gemmatimonadetes phylum=Gemmatimonadetes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Cytochrome c oxidase caa3-type, assembly factor CtaG-related protein
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
PLM4_65_coex_sep16_scaffold_5100_4
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

2104..3420
DNA (1317bp) protein (439aa)
nucleotide sugar dehydrogenase (EC:1.1.1.22)
Nucleotide sugar dehydrogenase bin=GWC2_Methylomirabilis_70_16 species=Desulfarculus baarsii genus=Desulfarculus taxon_order=Desulfarculales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM4_65_coex_sep16_scaffold_5100_5
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

3454..4389
DNA (936bp) protein (312aa)
NAD-dependent epimerase/dehydratase bin=GWA2_Methylomirabilis_73_35 species=Rhodothermus marinus genus=Rhodothermus taxon_order=Bacteroidetes Order II. Incertae sedis taxon_class=unknown phylum=Bacteroidetes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
NAD-dependent epimerase/dehydratase
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
PLM4_65_coex_sep16_scaffold_5100_6
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

4421..4591
DNA (171bp) protein (57aa)
hypothetical protein; K09791 hypothetical protein bin=bin7_NC10_sister species=Thermomicrobium roseum genus=Thermomicrobium taxon_order=Thermomicrobiales taxon_class=Thermomicrobia phylum=Chloroflexi tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM4_65_coex_sep16_scaffold_5100_7
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

4711..5667
DNA (957bp) protein (319aa)
Nucleotidyl transferase bin=GWC2_Methylomirabilis_70_24 species=Conexibacter woesei genus=Conexibacter taxon_order=Solirubrobacterales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
nucleotidyl transferase
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM4_65_coex_sep16_scaffold_5100_8
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

5738..7528
DNA (1791bp) protein (597aa)
Elongation factor 4 bin=GWF2_Methylomirabilis_70_14 species=Alicyclobacillus acidocaldarius genus=Alicyclobacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
GTP-binding protein LepA
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM4_65_coex_sep16_scaffold_5100_9
unknown

Not on your lists

7533..7667
DNA (135bp) protein (45aa)

This feature has no annotations

Displaying 9 items

View Taxonomy