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PLM4_65_coex_sep16_scaffold_5732

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_coex_sep16_scaffold_5732_1
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

3..467
DNA (465bp) protein (155aa)
Elongation factor Tu bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
tufB; Elongation factor Tu (EF-Tu)
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
PLM4_65_coex_sep16_scaffold_5732_2
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists


471..791
DNA (321bp) protein (107aa)
30S ribosomal protein S10; K02946 small subunit ribosomal protein S10 bin=bin7_NC10_sister species=Desulfarculus baarsii genus=Desulfarculus taxon_order=Desulfarculales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
30S ribosomal protein S10
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
PLM4_65_coex_sep16_scaffold_5732_3
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists


935..1393
DNA (459bp) protein (153aa)
50S ribosomal protein L3 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
rplC; 50S ribosomal protein L3
Tax=GWA2_Rokubacteria_73_35_curated
PLM4_65_coex_sep16_scaffold_5732_4
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists


1393..2019
DNA (627bp) protein (209aa)
50S ribosomal protein L4 bin=GWA2_Methylomirabilis_73_35 species=Pelotomaculum thermopropionicum genus=Pelotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
rplD; 50S ribosomal protein L4
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM4_65_coex_sep16_scaffold_5732_5
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists


2016..2306
DNA (291bp) protein (97aa)
50S ribosomal protein L23 bin=GWA2_Methylomirabilis_73_35 species=Thermodesulfatator indicus genus=Thermodesulfatator taxon_order=Thermodesulfobacteriales taxon_class=Thermodesulfobacteria phylum=Thermodesulfobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
ribosomal protein L25/L23
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM4_65_coex_sep16_scaffold_5732_6
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists


2312..3136
DNA (825bp) protein (275aa)
50S ribosomal protein L2 bin=GWF2_Methylomirabilis_70_14 species=unknown genus=Thermaerobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
rplB; 50S ribosomal protein L2
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM4_65_coex_sep16_scaffold_5732_7
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists


3146..3439
DNA (294bp) protein (98aa)
SSU ribosomal protein S19p (S15e) bin=GWA2_Methylomirabilis_73_35 species=Nitrospina gracilis genus=Nitrospina taxon_order=Nitrospinales taxon_class=Nitrospinia phylum=Nitrospinae tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
30S ribosomal protein S19
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
PLM4_65_coex_sep16_scaffold_5732_8
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists


3447..3962
DNA (516bp) protein (172aa)
50S ribosomal protein L22 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
rplV; 50S ribosomal protein L22
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM4_65_coex_sep16_scaffold_5732_9
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists


3966..4610
DNA (645bp) protein (215aa)
rpsC; 30S ribosomal protein S3; K02982 small subunit ribosomal protein S3 bin=bin7_NC10_sister species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
rpsC; 30S ribosomal protein S3
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
PLM4_65_coex_sep16_scaffold_5732_10
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists


4622..5038
DNA (417bp) protein (139aa)
50S ribosomal protein L16 bin=GWC2_Methylomirabilis_70_16 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
rplP; 50S ribosomal protein L16
Tax=GWA2_Rokubacteria_73_35_curated
PLM4_65_coex_sep16_scaffold_5732_11
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists


5035..5388
DNA (354bp) protein (118aa)
50S ribosomal protein L29 bin=GWA2_Methylomirabilis_73_35 species=Moorella thermoacetica genus=Moorella taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
50S ribosomal protein L29
Tax=GWA2_Rokubacteria_73_35_curated
PLM4_65_coex_sep16_scaffold_5732_12
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists


5393..5647
DNA (255bp) protein (85aa)
30S ribosomal protein S17 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Caldicellulosiruptor taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
rpsQ; 30S ribosomal protein S17
Tax=GWA2_Rokubacteria_73_35_curated
PLM4_65_coex_sep16_scaffold_5732_13
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists


5644..6012
DNA (369bp) protein (123aa)
50S ribosomal protein L14 bin=GWA2_Methylomirabilis_73_35 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
rplN; 50S ribosomal protein L14
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
PLM4_65_coex_sep16_scaffold_5732_14
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists


6012..6338
DNA (327bp) protein (109aa)
50S ribosomal protein L24 bin=GWA2_Methylomirabilis_73_35 species=Thermincola potens genus=Thermincola taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
50S ribosomal protein L24
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM4_65_coex_sep16_scaffold_5732_15
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists


6343..7029
DNA (687bp) protein (229aa)
50S ribosomal protein L5 bin=GWF2_Methylomirabilis_70_14 species=Candidatus Koribacter versatilis genus=Candidatus Koribacter taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
ribosomal protein L5
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
PLM4_65_coex_sep16_scaffold_5732_16
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists


7033..7218
DNA (186bp) protein (62aa)
50S ribosomal protein L5 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Koribacter versatilis genus=Candidatus Koribacter taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
rpsZ; 30S ribosomal protein S14
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM4_65_coex_sep16_scaffold_5732_17
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists


7221..7616
DNA (396bp) protein (132aa)
30S ribosomal protein S8; K02994 small subunit ribosomal protein S8 bin=bin7_NC10_sister species=Ammonifex degensii genus=Ammonifex taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=bin7_NC10_sister organism_group=NC10
30S ribosomal protein S8
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
PLM4_65_coex_sep16_scaffold_5732_18
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists


7628..8005
DNA (378bp) protein (126aa)
50S ribosomal protein L6 bin=GWA2_Methylomirabilis_73_35 species=Syntrophothermus lipocalidus genus=Syntrophothermus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
50S ribosomal protein L6
Tax=GWA2_Rokubacteria_73_35_curated
Displaying 18 items

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