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PLM4_65_coex_sep16_scaffold_6460

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_coex_sep16_scaffold_6460_1
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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2..451
DNA (450bp) protein (150aa)
methyl-accepting chemotaxis protein bin=GWC2_Methylomirabilis_70_24 species=Gemmata obscuriglobus genus=Gemmata taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
methyl-accepting chemotaxis protein
Tax=GWA2_Rokubacteria_70_23_curated
PLM4_65_coex_sep16_scaffold_6460_2
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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453..908
DNA (456bp) protein (152aa)
Chemotaxis signal transduction protein CheW bin=GWC2_Methylomirabilis_70_24 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
chemotaxis protein CheW
Tax=GWA2_Rokubacteria_70_23_curated
PLM4_65_coex_sep16_scaffold_6460_3
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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905..1720
DNA (816bp) protein (272aa)
cheR; chemotaxis protein methyltransferase (EC:2.1.1.80)
Chemotaxis protein methyltransferase bin=GWC2_Methylomirabilis_70_16 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Tax=GWA2_Rokubacteria_70_23_curated
PLM4_65_coex_sep16_scaffold_6460_4
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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1724..2101
DNA (378bp) protein (126aa)
response regulator receiver protein bin=GWC2_Methylomirabilis_70_16 species=Marinobacterium stanieri genus=Marinobacterium taxon_order=Alteromonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
cheY; chemotaxis protein cheY
Tax=GWC2_Rokubacteria_70_16_curated
PLM4_65_coex_sep16_scaffold_6460_5
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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2098..2658
DNA (561bp) protein (187aa)
Probable chemoreceptor glutamine deamidase CheD bin=GWC2_Methylomirabilis_70_16 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
MCP proteins methylation stimulator CheD
Tax=GWC2_Rokubacteria_70_16_curated
PLM4_65_coex_sep16_scaffold_6460_6
unknown

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2663..2980
DNA (318bp) protein (106aa)

This feature has no annotations

PLM4_65_coex_sep16_scaffold_6460_7
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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2983..3408
DNA (426bp) protein (142aa)
Response regulator with CheY-like receiver domain and winged-helix DNA-binding domain bin=GWC2_Methylomirabilis_70_16 species=Myxococcus stipitatus genus=Myxococcus taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
dctD; C4-dicarboxylate transport transcriptional regulatory protein dctD
Tax=GWC2_Rokubacteria_70_16_curated
PLM4_65_coex_sep16_scaffold_6460_8
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

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3405..4988
DNA (1584bp) protein (528aa)
Histidine kinase bin=GWA2_Methylomirabilis_73_35 species=Aromatoleum aromaticum genus=Aromatoleum taxon_order=Rhodocyclales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
histidine kinase
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
PLM4_65_coex_sep16_scaffold_6460_9
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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comp(5001..5912)
DNA (912bp) protein (304aa)
Oligopeptide ABC transporter permease protein bin=GWF2_Methylomirabilis_70_14 species=Ketogulonicigenium vulgare genus=Ketogulonicigenium taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
gsiD; Oligopeptide ABC transporter permease protein
Tax=GWA2_Rokubacteria_70_23_curated
PLM4_65_coex_sep16_scaffold_6460_10
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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comp(5878..6696)
DNA (819bp) protein (273aa)
Binding-protein-dependent transport systems inner membrane component bin=GWF2_Methylomirabilis_70_14 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
binding-protein-dependent transport systems inner membrane component
Tax=GWC2_Rokubacteria_70_16_curated
Displaying 10 items

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