ggKbase home page

PLM4_65_coex_sep16_scaffold_8499

Search features with annotation key words

Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_coex_sep16_scaffold_8499_1
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

comp(2..634)
DNA (633bp) protein (211aa)
Cysteine desulfurase bin=GWF2_Methylomirabilis_70_14 species=Mahella australiensis genus=Mahella taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
cysteine desulfurase
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
PLM4_65_coex_sep16_scaffold_8499_2
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

676..999
DNA (324bp) protein (108aa)
Putative uncharacterized protein bin=GWA2_Methylomirabilis_73_35 species=Candidatus Poribacteria sp. WGA-A3 genus=unknown taxon_order=unknown taxon_class=unknown phylum=Poribacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM4_65_coex_sep16_scaffold_8499_3
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

1010..1366
DNA (357bp) protein (119aa)
Putative uncharacterized protein bin=GWA2_Methylomirabilis_73_35 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
Tax=GWA2_Rokubacteria_73_35_curated
PLM4_65_coex_sep16_scaffold_8499_4
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

1366..1590
DNA (225bp) protein (75aa)
hypothetical protein bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
PLM4_65_coex_sep16_scaffold_8499_5
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

comp(1709..1915)
DNA (207bp) protein (69aa)
hypothetical protein bin=bin7_NC10_sister species=Gloeobacter violaceus genus=Gloeobacter taxon_order=Gloeobacterales taxon_class=Gloeobacteria phylum=Cyanobacteria tax=bin7_NC10_sister organism_group=NC10
iscX; FeS assembly protein IscX
Tax=CSP1_6_Rokubacteria
PLM4_65_coex_sep16_scaffold_8499_6
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

comp(1977..2300)
DNA (324bp) protein (108aa)
Ferredoxin, 2Fe-2S type, ISC system bin=GWA2_Methylomirabilis_73_35 species=Acidobacterium capsulatum genus=Acidobacterium taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
ferredoxin
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
PLM4_65_coex_sep16_scaffold_8499_7
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(2300..4174)
DNA (1875bp) protein (625aa)
hscA; chaperone protein HscA; K04043 molecular chaperone DnaK bin=bin7_NC10_sister species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=bin7_NC10_sister organism_group=NC10
hscA; chaperone protein HscA
Tax=GWA2_Rokubacteria_73_35_curated
PLM4_65_coex_sep16_scaffold_8499_8
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(4152..4748)
DNA (597bp) protein (199aa)
Co-chaperone protein HscB (Hsc20) bin=GWA2_Methylomirabilis_73_35 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hscB; co-chaperone protein HscB
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM4_65_coex_sep16_scaffold_8499_9
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(4872..5201)
DNA (330bp) protein (110aa)
Iron-sulfur cluster assembly protein IscA bin=GWA2_Methylomirabilis_73_35 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
iron-sulfur cluster assembly accessory protein
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM4_65_coex_sep16_scaffold_8499_10
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(5228..5638)
DNA (411bp) protein (137aa)
iscU; iron-sulfur cluster assembly protein IscU; K04488 nitrogen fixation protein NifU and related proteins bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=bin7_NC10_sister organism_group=NC10
iscU; scaffold protein
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM4_65_coex_sep16_scaffold_8499_11
unknown

Not on your lists

comp(5652..5726)
DNA (75bp) protein (25aa)

This feature has no annotations

Displaying 11 items

View Taxonomy