ggKbase home page

PLM3_127_b1_sep16_scaffold_8838

Search features with annotation key words

Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_127_b1_sep16_scaffold_8838_1
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

1..174
DNA (174bp) protein (58aa)
Phosphatidylglycerophosphatase A bin=GWC2_Methylomirabilis_70_24 species=delta proteobacterium NaphS2 genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
phosphatidylglycerophosphatase A
Tax=GWA2_Rokubacteria_70_23_curated
PLM3_127_b1_sep16_scaffold_8838_2
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

171..1421
DNA (1251bp) protein (417aa)
CinA-like protein bin=GWF2_Methylomirabilis_70_14 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
cinA; competence-damage inducible protein
Tax=GWA2_Rokubacteria_70_23_curated
PLM3_127_b1_sep16_scaffold_8838_3
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

1459..2037
DNA (579bp) protein (193aa)
2'-5' RNA ligase bin=GWC2_Methylomirabilis_70_24 species=Thermovirga lienii genus=Thermovirga taxon_order=Synergistales taxon_class=Synergistia phylum=Synergistetes tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
hypothetical protein
Tax=GWA2_Rokubacteria_70_23_curated
PLM3_127_b1_sep16_scaffold_8838_4
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

2357..2926
DNA (570bp) protein (190aa)
Suspect SCG annotation. See neighboring gene [PLM3_127_b1_sep16_scaffold_8838_5].
RecA protein bin=GWC2_Methylomirabilis_70_16 species=Saccharomonospora paurometabolica genus=Saccharomonospora taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
protein recA
Tax=GWC2_Rokubacteria_70_16_curated
PLM3_127_b1_sep16_scaffold_8838_5
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists


2923..4284
DNA (1362bp) protein (454aa)
RecA protein bin=GWC2_Methylomirabilis_70_16 species=Saccharomonospora paurometabolica genus=Saccharomonospora taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
protein recA
Tax=GWC2_Rokubacteria_70_16_curated
PLM3_127_b1_sep16_scaffold_8838_6
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

4298..5500
DNA (1203bp) protein (401aa)
Twitching motility protein bin=GWC2_Methylomirabilis_70_16 species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
pilT-1; twitching motility pilus retraction protein
Tax=GWC2_Rokubacteria_70_16_curated
PLM3_127_b1_sep16_scaffold_8838_7
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

5504..6073
DNA (570bp) protein (190aa)
Regulatory protein RecX bin=GWC2_Methylomirabilis_70_16 species=Streptomyces clavuligerus genus=Streptomyces taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hypothetical protein
Tax=GWC2_Rokubacteria_70_16_curated
PLM3_127_b1_sep16_scaffold_8838_8
R_Rokubacteria_69_13, Rokubacteria, Bacteria

Not on your lists

comp(6623..6859)
DNA (237bp) protein (79aa)
Tax=RIFCSPHIGHO2_02_FULL_Rokubacteria_69_13_curated
PLM3_127_b1_sep16_scaffold_8838_9
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists


7891..8691
DNA (801bp) protein (267aa)
alaS; alanyl-tRNA synthetase (EC:6.1.1.7)
Alanine--tRNA ligase bin=GWC2_Methylomirabilis_70_24 species=Heliobacterium modesticaldum genus=Heliobacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
Tax=GWA2_Rokubacteria_70_23_curated
Displaying 9 items

View Taxonomy