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PLM3_127_b1_sep16_scaffold_21013

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_127_b1_sep16_scaffold_21013_1
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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comp(3..929)
DNA (927bp) protein (309aa)
Ribonuclease Y bin=GWC2_Methylomirabilis_70_24 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
HAD superfamily hydrolase
Tax=GWA2_Rokubacteria_70_23_curated
PLM3_127_b1_sep16_scaffold_21013_2
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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comp(1787..2089)
DNA (303bp) protein (101aa)
Putative uncharacterized protein bin=GWC2_Methylomirabilis_70_24 species=Plesiocystis pacifica genus=Plesiocystis taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
hypothetical protein
Tax=GWA2_Rokubacteria_70_23_curated
PLM3_127_b1_sep16_scaffold_21013_3
unknown

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comp(2111..2299)
DNA (189bp) protein (63aa)

This feature has no annotations

PLM3_127_b1_sep16_scaffold_21013_4
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(2311..3282)
DNA (972bp) protein (324aa)
Phenylalanine--tRNA ligase beta subunit bin=GWC2_Methylomirabilis_70_24 species=Desulfobacca acetoxidans genus=Desulfobacca taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
pheT; phenylalanyl-tRNA synthetase subunit beta
Tax=GWA2_Rokubacteria_70_23_curated
PLM3_127_b1_sep16_scaffold_21013_5
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(3306..4523)
DNA (1218bp) protein (406aa)
Phenylalanine--tRNA ligase beta subunit bin=GWC2_Methylomirabilis_70_24 species=Desulfobacca acetoxidans genus=Desulfobacca taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
phenylalanyl-tRNA synthetase subunit beta
Tax=GWA2_Rokubacteria_70_23_curated
PLM3_127_b1_sep16_scaffold_21013_6
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists


comp(4651..5694)
DNA (1044bp) protein (348aa)
Phenylalanyl-tRNA synthetase subunit alpha; K01889 phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] bin=bin7_NC10_sister species=Dethiobacter alkaliphilus genus=Dethiobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=bin7_NC10_sister organism_group=NC10
Phenylalanyl-tRNA synthetase subunit alpha
Tax=GWA2_Rokubacteria_70_23_curated
PLM3_127_b1_sep16_scaffold_21013_7
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists


comp(5697..6053)
DNA (357bp) protein (119aa)
50S ribosomal protein L20 bin=GWF2_Methylomirabilis_70_14 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
rplT; 50S ribosomal protein L20
Tax=GWA2_Rokubacteria_70_23_curated
PLM3_127_b1_sep16_scaffold_21013_8
R_Rokubacteria_71_18, Rokubacteria, Bacteria

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comp(6066..6263)
DNA (198bp) protein (66aa)
50S ribosomal protein L35 bin=GWF2_Methylomirabilis_70_14 species=unknown genus=Megamonas taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
50S ribosomal protein L35
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
PLM3_127_b1_sep16_scaffold_21013_9
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(6330..6791)
DNA (462bp) protein (154aa)
Translation initiation factor IF-3 bin=GWF2_Methylomirabilis_70_14 species=unknown genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
infC; translation initiation factor IF-3
Tax=GWA2_Rokubacteria_70_23_curated
PLM3_127_b1_sep16_scaffold_21013_10
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(6875..7801)
DNA (927bp) protein (309aa)
thrS; threonyl-tRNA synthetase (EC:6.1.1.3)
Threonine--tRNA ligase bin=GWC2_Methylomirabilis_70_16 species=Pelotomaculum thermopropionicum genus=Pelotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Tax=GWC2_Rokubacteria_70_16_curated
Displaying 10 items

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