ggKbase home page

PLM3_127_b2_sep16_scaffold_5304

Search features with annotation key words

Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_127_b2_sep16_scaffold_5304_1
R_NC10_66_22, NC10, Bacteria

Not on your lists

1..261
DNA (261bp) protein (87aa)
Candidate ABC type Fe3+ transport system, permease component with duplicated domains bin=GWD2_Deltaproteobacteria_55_8 species=Ramlibacter tataouinensis genus=Ramlibacter taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
iron ABC transporter permease
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM3_127_b2_sep16_scaffold_5304_2
R_NC10_66_22, NC10, Bacteria

Not on your lists

267..1355
DNA (1089bp) protein (363aa)
Candidate ABC transporter, ATP-binding component probably involved in an Fe3+ transport system bin=GWD2_Deltaproteobacteria_55_8 species=Ramlibacter tataouinensis genus=Ramlibacter taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
afuC; ABC transporter ATP-binding protein
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM3_127_b2_sep16_scaffold_5304_3
Rivularia sp. PCC 7116, Rivularia, Nostocales, Cyanobacteria, Bacteria

Not on your lists

1412..2797
DNA (1386bp) protein (462aa)
Subtilisin-like serine protease Tax=Rivularia sp. PCC 7116 RepID=K9RAT4_9CYAN
subtilisin-like serine protease
Subtilisin-like serine protease {ECO:0000313|EMBL:AFY54464.1}; species="Bacteria; Cyanobacteria; Nostocales; Rivulariaceae; Rivularia.;" source="Rivularia sp. PCC 7116.;"
PLM3_127_b2_sep16_scaffold_5304_4
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

2794..3912
DNA (1119bp) protein (373aa)
putative carbamoylphosphate synthase large subunit, short form bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Candidatus Saccharibacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
PLM3_127_b2_sep16_scaffold_5304_5
unknown

Not on your lists

3916..4122
DNA (207bp) protein (69aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_5304_6
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(4289..7519)
DNA (3231bp) protein (1077aa)
Adenylyl cyclase class-3/4/guanylyl cyclase:Tetratricopeptide TPR_4 bin=GWC2_Methylomirabilis_70_16 species=Cupriavidus necator genus=Cupriavidus taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hypothetical protein
Tax=GWC2_Rokubacteria_70_16_curated
PLM3_127_b2_sep16_scaffold_5304_7
RHI_Verrucumicrobia_41_10, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(7900..8124)
DNA (225bp) protein (75aa)
Carbohydrate-selective porin, OprB family Tax=Pseudovibrio sp. JE062 RepID=B6R9U4_9RHOB
Carbohydrate-selective porin OprB
Tax=RIFCSPHIGHO2_12_FULL_Verrucumicrobia_41_10_curated
PLM3_127_b2_sep16_scaffold_5304_8
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8522..10753
DNA (2232bp) protein (744aa)
Alpha,alpha-trehalose-phosphate synthase (UDP-forming) bin=GWA2_Deltaproteo_65_63 species=Sideroxydans lithotrophicus genus=Sideroxydans taxon_order=Gallionellales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Deltaproteo_65_63 organism_group=Deltaproteobacteria
alpha,alpha-trehalose-phosphate synthase
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
PLM3_127_b2_sep16_scaffold_5304_9
R_Betaproteobacteria_65_24, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10777..11541
DNA (765bp) protein (255aa)
trehalose-phosphatase (EC:3.1.3.12)
Trehalose-phosphatase Tax=Sideroxydans lithotrophicus (strain ES-1) RepID=D5CN52_SIDLE
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_65_24_curated
PLM3_127_b2_sep16_scaffold_5304_10
GWA2_Rhodocyclales_65_20_curated, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11538..13331
DNA (1794bp) protein (598aa)
Glycoside hydrolase 15-related protein Tax=Sideroxydans lithotrophicus (strain ES-1) RepID=D5CN53_SIDLE
glycoside hydrolase 15-related protein
Tax=GWA2_Rhodocyclales_65_20_curated
PLM3_127_b2_sep16_scaffold_5304_11
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

13415..13900
DNA (486bp) protein (162aa)
UPF0761 membrane protein DSC_12970 bin=GWC2_Methylomirabilis_70_16 species=Pseudoxanthomonas spadix genus=Pseudoxanthomonas taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Tax=GWC2_Rokubacteria_70_16_curated
Displaying 11 items

View Taxonomy