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PLM3_127_b2_sep16_scaffold_4729

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_127_b2_sep16_scaffold_4729_1
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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147..515
DNA (369bp) protein (123aa)
Putative oxidoreductase bin=GWF2_Methylomirabilis_70_14 species=Nocardia farcinica genus=Nocardia taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
putative FAD dependent oxidoreductase
Tax=GWA2_Rokubacteria_70_23_curated
PLM3_127_b2_sep16_scaffold_4729_2
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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572..1408
DNA (837bp) protein (279aa)
Uncharacterized protein bin=GWC2_Methylomirabilis_70_24 species=Gordonia paraffinivorans genus=Gordonia taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
fabL; short-chain dehydrogenase/reductase SDR
Tax=GWA2_Rokubacteria_70_23_curated
PLM3_127_b2_sep16_scaffold_4729_3
unknown

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comp(2281..2577)
DNA (297bp) protein (99aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_4729_4
unknown

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comp(2587..2757)
DNA (171bp) protein (57aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_4729_5
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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comp(2967..3083)
DNA (117bp) protein (39aa)
id=2874658 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Tax=GWC2_Rokubacteria_70_16_curated
PLM3_127_b2_sep16_scaffold_4729_6
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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3169..3519
DNA (351bp) protein (117aa)
Histidine triad (HIT) protein bin=GWC2_Methylomirabilis_70_16 species=Thiothrix nivea genus=Thiothrix taxon_order=Thiotrichales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
HIT family hydrolase, diadenosine tetraphosphate hydrolase
Tax=GWC2_Rokubacteria_70_16_curated
PLM3_127_b2_sep16_scaffold_4729_7
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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3516..4259
DNA (744bp) protein (248aa)
Phosphonate transport system ATP-binding protein bin=GWC2_Methylomirabilis_70_16 species=uncultured prokaryote genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
putative ABC transport ATP-binding protein
Tax=GWC2_Rokubacteria_70_16_curated
PLM3_127_b2_sep16_scaffold_4729_8
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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4256..5008
DNA (753bp) protein (251aa)
Phosphonate ABC transporter, inner membrane subunit bin=GWC2_Methylomirabilis_70_16 species=Desulfotomaculum kuznetsovii genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
phosphonate ABC transporter permease
Tax=GWC2_Rokubacteria_70_16_curated
PLM3_127_b2_sep16_scaffold_4729_9
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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5037..5774
DNA (738bp) protein (246aa)
Putative peptidase, S54 (Rhomboid) family bin=GWC2_Methylomirabilis_70_16 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Rhomboid family protein
Tax=GWC2_Rokubacteria_70_16_curated
PLM3_127_b2_sep16_scaffold_4729_10
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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5874..8366
DNA (2493bp) protein (831aa)
Nucleotidyl transferase bin=GWC2_Methylomirabilis_70_24 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
nucleotidyltransferase
Tax=GWA2_Rokubacteria_70_23_curated
PLM3_127_b2_sep16_scaffold_4729_11
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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8378..9238
DNA (861bp) protein (287aa)
rRNA methyltransferase, YqxC-related, putative bin=GWC2_Methylomirabilis_70_24 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
rRNA methyltransferase
Tax=GWC2_Rokubacteria_70_16_curated
PLM3_127_b2_sep16_scaffold_4729_12
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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9235..10092
DNA (858bp) protein (286aa)
inorganic polyphosphate/ATP-NAD kinase (Poly(P)/ATP NAD kinase)(ppnK) (EC:2.7.1.23)
Probable inorganic polyphosphate/ATP-NAD kinase bin=GWC2_Methylomirabilis_70_16 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Tax=GWA2_Rokubacteria_70_23_curated
PLM3_127_b2_sep16_scaffold_4729_13
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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10165..10371
DNA (207bp) protein (69aa)
DNA repair protein RecN bin=GWF2_Methylomirabilis_70_14 species=Thermaerobacter marianensis genus=Thermaerobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
DNA repair protein RecN
Tax=GWA2_Rokubacteria_70_23_curated
Displaying 13 items

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