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PLM3_127_b2_sep16_scaffold_36676

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_127_b2_sep16_scaffold_36676_1
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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41..241
DNA (201bp) protein (67aa)
Cold-shock DNA-binding domain protein bin=GWC2_Methylomirabilis_70_24 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
cold shock DNA/RNA-binding protein
Tax=GWC2_Rokubacteria_70_16_curated
PLM3_127_b2_sep16_scaffold_36676_2
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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563..763
DNA (201bp) protein (67aa)
Cold-shock DNA-binding domain protein bin=GWC2_Methylomirabilis_70_24 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
cold-shock DNA-binding domain-containing protein
Tax=GWA2_Rokubacteria_70_23_curated
PLM3_127_b2_sep16_scaffold_36676_3
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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comp(1258..1599)
DNA (342bp) protein (114aa)
Competence protein ComEA helix-hairpin-helix repeat protein bin=GWC2_Methylomirabilis_70_16 species=Paenibacillus sp. Aloe-11 genus=Paenibacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
competence protein ComEA-like protein
Tax=GWC2_Rokubacteria_70_16_curated
PLM3_127_b2_sep16_scaffold_36676_4
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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comp(1696..3747)
DNA (2052bp) protein (684aa)
ABC transporter ATP-binding protein with duplicated ATPase domains (EC:3.6.3.-)
Putative ABC transporter, ATP-binding protein with duplicated ATPase domains bin=GWF2_Methylomirabilis_70_14 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=GWC2_Rokubacteria_70_16_curated
PLM3_127_b2_sep16_scaffold_36676_5
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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comp(3758..4156)
DNA (399bp) protein (133aa)
Pyridoxamine 5'-phosphate oxidase bin=GWC2_Methylomirabilis_70_16 species=Rhodovulum sp. PH10 genus=Rhodovulum taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
PPOX class F420-dependent enzyme
Tax=GWC2_Rokubacteria_70_16_curated
PLM3_127_b2_sep16_scaffold_36676_6
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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comp(4153..4302)
DNA (150bp) protein (50aa)
id=4193619 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Tax=GWC2_Rokubacteria_70_16_curated
PLM3_127_b2_sep16_scaffold_36676_7
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(4315..4503)
DNA (189bp) protein (63aa)
id=4193620 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Tax=GWC2_Rokubacteria_70_16_curated
PLM3_127_b2_sep16_scaffold_36676_8
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(4500..4937)
DNA (438bp) protein (146aa)
id=4560656 bin=GWC2_Methylomirabilis_70_24 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
Tax=GWA2_Rokubacteria_70_23_curated
Displaying 8 items

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