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PLM1_100_coex_sep16_scaffold_51

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Displaying items 1-30 of 58 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_100_coex_sep16_scaffold_51_1
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

1..513
DNA (513bp) protein (171aa)
Luciferase family protein bin=GWC2_Methylomirabilis_70_16 species=unknown genus=Roseiflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
F420-dependent oxidoreductase
Tax=GWC2_Rokubacteria_70_16_curated
PLM1_100_coex_sep16_scaffold_51_2
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

552..1100
DNA (549bp) protein (183aa)
def; peptide deformylase 2 (PDF 2) (Polypeptide deformylase 2) (EC:3.5.1.88)
Peptide deformylase bin=GWF2_Methylomirabilis_70_14 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=CSP1_6_Rokubacteria
PLM1_100_coex_sep16_scaffold_51_3
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

1261..1464
DNA (204bp) protein (68aa)
hypothetical protein GobsU_30125 bin=GWF2_Methylomirabilis_70_14 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=CSP1_6_Rokubacteria
PLM1_100_coex_sep16_scaffold_51_4
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

1461..2120
DNA (660bp) protein (220aa)
Putative uncharacterized protein bin=GWC2_Methylomirabilis_70_16 species=Sorangium cellulosum genus=Sorangium taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hypothetical protein
Tax=GWC2_Rokubacteria_70_16_curated
PLM1_100_coex_sep16_scaffold_51_5
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

2120..2953
DNA (834bp) protein (278aa)
Glr2493 protein bin=GWC2_Methylomirabilis_70_16 species=Chroococcidiopsis thermalis genus=Chroococcidiopsis taxon_order=Pleurocapsales taxon_class=unknown phylum=Cyanobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hypothetical protein
Tax=GWC2_Rokubacteria_70_16_curated
PLM1_100_coex_sep16_scaffold_51_6
R_Rokubacteria_69_13, Rokubacteria, Bacteria

Not on your lists

2959..3687
DNA (729bp) protein (243aa)
Uncharacterized protein bin=GWF2_Methylomirabilis_70_14 species=Achromobacter arsenitoxydans genus=Achromobacter taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
Tax=RIFCSPHIGHO2_02_FULL_Rokubacteria_69_13_curated
PLM1_100_coex_sep16_scaffold_51_7
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

3733..4410
DNA (678bp) protein (226aa)
FAD dependent oxidoreductase bin=GWC2_Methylomirabilis_70_16 species=unknown genus=Roseiflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
FAD dependent oxidoreductase
Tax=GWC2_Rokubacteria_70_16_curated
PLM1_100_coex_sep16_scaffold_51_8
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

4410..4880
DNA (471bp) protein (157aa)
FAD dependent oxidoreductase; K00303 sarcosine oxidase, subunit beta [EC:1.5.3.1] bin=bin7_NC10_sister species=unknown genus=Roseiflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=bin7_NC10_sister organism_group=NC10
FAD dependent oxidoreductase
Tax=GWC2_Rokubacteria_70_16_curated
PLM1_100_coex_sep16_scaffold_51_9
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

4905..5915
DNA (1011bp) protein (337aa)
TRAP transporter, solute receptor (TAXI family protein) bin=GWC2_Methylomirabilis_70_16 species=Nitratireductor indicus genus=Nitratireductor taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
TRAP transporter, solute receptor (TAXI family protein)
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
PLM1_100_coex_sep16_scaffold_51_10
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

5965..7821
DNA (1857bp) protein (619aa)
TRAP transporter, 4TM/12TM fusion protein bin=GWC2_Methylomirabilis_70_16 species=Aminomonas paucivorans genus=Aminomonas taxon_order=Synergistales taxon_class=Synergistia phylum=Synergistetes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
TRAP transporter, 4TM/12TM fusion protein
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
PLM1_100_coex_sep16_scaffold_51_11
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(7808..8194)
DNA (387bp) protein (129aa)
nudix hydrolase (EC:3.6.1.-)
Nudix family protein, MutT subfamily bin=GWC2_Methylomirabilis_70_16 species=Chlorobaculum tepidum genus=Chlorobaculum taxon_order=Chlorobiales taxon_class=Chlorobia phylum=Chlorobi tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Tax=GWC2_Rokubacteria_70_16_curated
PLM1_100_coex_sep16_scaffold_51_12
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(8191..8580)
DNA (390bp) protein (130aa)
3-alpha-(Or 20-beta)-hydroxysteroid dehydrogenase bin=GWF2_Methylomirabilis_70_14 species=Frankia sp. CN3 genus=Frankia taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
short chain dehydrogenase
Tax=GWA2_Rokubacteria_70_23_curated
PLM1_100_coex_sep16_scaffold_51_13
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(8574..8891)
DNA (318bp) protein (106aa)
Short-chain dehydrogenase/reductase SDR bin=GWC2_Methylomirabilis_70_16 species=Stackebrandtia nassauensis genus=Stackebrandtia taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
short-chain dehydrogenase/reductase SDR
Tax=GWC2_Rokubacteria_70_16_curated
PLM1_100_coex_sep16_scaffold_51_14
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(8878..9588)
DNA (711bp) protein (237aa)
mutY; A/G-specific adenine glycosylase (EC:3.2.2.-)
A/G-specific adenine glycosylase bin=GWC2_Methylomirabilis_70_16 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Tax=GWC2_Rokubacteria_70_16_curated
PLM1_100_coex_sep16_scaffold_51_15
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

9652..10644
DNA (993bp) protein (331aa)
glycine cleavage system t protein (EC:2.1.2.10)
Aminomethyltransferase, putative bin=GWC2_Methylomirabilis_70_16 species=Cystobacter fuscus genus=Cystobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Tax=GWC2_Rokubacteria_70_16_curated
PLM1_100_coex_sep16_scaffold_51_16
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

10659..12731
DNA (2073bp) protein (691aa)
Putative uncharacterized protein bin=GWC2_Methylomirabilis_70_16 species=Rubrobacter xylanophilus genus=Rubrobacter taxon_order=Rubrobacterales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hypothetical protein
Tax=GWC2_Rokubacteria_70_16_curated
PLM1_100_coex_sep16_scaffold_51_17
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

12982..13764
DNA (783bp) protein (261aa)
Thiazole synthase bin=GWF2_Methylomirabilis_70_14 species=unknown genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
thiG; thiazole synthase
Tax=GWA2_Rokubacteria_70_23_curated
PLM1_100_coex_sep16_scaffold_51_18
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

13752..14378
DNA (627bp) protein (209aa)
Thiamine-phosphate synthase bin=GWF2_Methylomirabilis_70_14 species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
thiamine-phosphate synthase
Tax=GWA2_Rokubacteria_70_23_curated
PLM1_100_coex_sep16_scaffold_51_19
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

14378..15490
DNA (1113bp) protein (371aa)
Glycine oxidase ThiO bin=GWC2_Methylomirabilis_70_16 species=Myxococcus stipitatus genus=Myxococcus taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
glycine oxidase ThiO
Tax=GWC2_Rokubacteria_70_16_curated
PLM1_100_coex_sep16_scaffold_51_20
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

15637..16971
DNA (1335bp) protein (445aa)
Amidohydrolase bin=GWC2_Methylomirabilis_70_16 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
amidohydrolase
Tax=GWA2_Rokubacteria_70_23_curated
PLM1_100_coex_sep16_scaffold_51_21
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

17023..17829
DNA (807bp) protein (269aa)
periplasmic-binding protein; K02016 iron complex transport system substrate-binding protein bin=bin7_NC10_sister species=unknown genus=Methylovorus taxon_order=Methylophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
periplasmic binding protein
Tax=CSP1_6_Rokubacteria
PLM1_100_coex_sep16_scaffold_51_22
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

17998..19434
DNA (1437bp) protein (479aa)
Putative peptidase TldD bin=GWC2_Methylomirabilis_70_24 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
tldD; peptidase TldD
Tax=GWA2_Rokubacteria_70_23_curated
PLM1_100_coex_sep16_scaffold_51_23
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

19440..20774
DNA (1335bp) protein (445aa)
Peptidase U62 bin=GWC2_Methylomirabilis_70_16 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hypothetical protein
Tax=GWC2_Rokubacteria_70_16_curated
PLM1_100_coex_sep16_scaffold_51_24
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

20771..21553
DNA (783bp) protein (261aa)
Deoxyribonuclease bin=GWC2_Methylomirabilis_70_24 species=Desmospora sp. 8437 genus=Desmospora taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
TatD-related deoxyribonuclease
Tax=GWA2_Rokubacteria_70_23_curated
PLM1_100_coex_sep16_scaffold_51_25
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

21664..22326
DNA (663bp) protein (221aa)
Putative uncharacterized protein bin=GWC2_Methylomirabilis_70_16 species=Syntrophobacter fumaroxidans genus=Syntrophobacter taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hypothetical protein
Tax=GWC2_Rokubacteria_70_16_curated
PLM1_100_coex_sep16_scaffold_51_26
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

22323..23468
DNA (1146bp) protein (382aa)
Peptidase M20B, peptidase T bin=GWD2_Deltaproteobacteria_55_8 species=Desulfuromonas acetoxidans genus=Desulfuromonas taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
peptidase T-like protein
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM1_100_coex_sep16_scaffold_51_27
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

23532..24326
DNA (795bp) protein (265aa)
alpha/beta hydrolase bin=bin7_NC10_sister species=Modestobacter marinus genus=Modestobacter taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin7_NC10_sister organism_group=NC10
alpha/beta hydrolase
Tax=CSP1_6_Rokubacteria
PLM1_100_coex_sep16_scaffold_51_28
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

24316..25311
DNA (996bp) protein (332aa)
Two-component response regulator bin=GWC2_Methylomirabilis_70_16 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hypothetical protein
Tax=GWC2_Rokubacteria_70_16_curated
PLM1_100_coex_sep16_scaffold_51_29
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(25381..26871)
DNA (1491bp) protein (497aa)
Fumarate reductase/succinate dehydrogenase flavoprotein-like protein bin=GWA2_Methylomirabilis_73_35 species=Afipia broomeae genus=Afipia taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
tricarballylate dehydrogenase
Tax=GWA2_Rokubacteria_73_35_curated
PLM1_100_coex_sep16_scaffold_51_30
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(26900..27688)
DNA (789bp) protein (263aa)
Undecaprenyl-diphosphatase {ECO:0000256|HAMAP-Rule:MF_01006}; EC=3.6.1.27 {ECO:0000256|HAMAP-Rule:MF_01006};; Bacitracin resistance protein {ECO:0000256|HAMAP-Rule:MF_01006}; Undecaprenyl pyrophosphate phosphatase {ECO:0000256|HAMAP-Rule:MF_01006}; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
Undecaprenyl-diphosphatase Tax=Pedosphaera parvula Ellin514 RepID=B9XCI2_9BACT
Undecaprenyl pyrophosphate phosphatase 1
Displaying items 1-30 of 58 in total

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