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PLM1_100_coex_sep16_scaffold_64

Search features with annotation key words

Displaying items 1-30 of 36 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_100_coex_sep16_scaffold_64_1
unknown

Not on your lists

comp(1..138)
DNA (138bp) protein (46aa)

This feature has no annotations

PLM1_100_coex_sep16_scaffold_64_2
Azoarcus sp. KH32C, Azoarcus, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

209..712
DNA (504bp) protein (168aa)
Uncharacterized protein Tax=Azoarcus sp. KH32C RepID=H0Q0N7_9RHOO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAL22534.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Azoarcus.;" source="Azoarcus sp. KH32C.;"
PLM1_100_coex_sep16_scaffold_64_3
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(728..1441)
DNA (714bp) protein (238aa)
Uncharacterized protein Tax=Pedosphaera parvula Ellin514 RepID=B9XGB7_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EEF61279.1}; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
PLM1_100_coex_sep16_scaffold_64_4
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

1555..2100
DNA (546bp) protein (182aa)
Enoyl-CoA hydratase/isomerase bin=GWC2_Methylomirabilis_70_24 species=Rubrobacter xylanophilus genus=Rubrobacter taxon_order=Rubrobacterales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM1_100_coex_sep16_scaffold_64_5
alpha proteobacterium U9-1i, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2097..2498
DNA (402bp) protein (134aa)
hypothetical protein Tax=Paenibacillus terrigena RepID=UPI00035D9D97
Uncharacterized protein {ECO:0000313|EMBL:GAM98618.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium U9-1i.;"
hypothetical protein
PLM1_100_coex_sep16_scaffold_64_6
Thermobispora bispora, Thermobispora, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2495..3292
DNA (798bp) protein (266aa)
Uncharacterized protein Tax=Thermobispora bispora (strain ATCC 19993 / DSM 43833 / CBS 139.67 / JCM 10125 / NBRC 14880 / R51) RepID=D6Y9Z6_THEBD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADG88139.1}; species="Bacteria; Actinobacteria; Actinobacteria incertae sedis; Thermobispora.;" source="Thermobispora bispora (strain ATCC 19993 / DSM 43833 / CBS 139.67 /; JCM 10125 / NBRC 14880 / R51).;"
PLM1_100_coex_sep16_scaffold_64_7
BJP_IG2069_Chloroflexi_70_12, Chloroflexi, Bacteria

Not on your lists

3348..4040
DNA (693bp) protein (231aa)
Cobalamin (Vitamin B12) biosynthesis CbiX protein Tax=Roseiflexus sp. (strain RS-1) RepID=A5UQT4_ROSS1
cobalamin (vitamin B12) biosynthesis CbiX protein
Tax=BJP_IG2069_Chloroflexi_70_12
PLM1_100_coex_sep16_scaffold_64_8
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

4142..4471
DNA (330bp) protein (110aa)
Urease accessory protein ureE bin=GWA2_Methylomirabilis_73_35 species=Deinococcus gobiensis genus=Deinococcus taxon_order=Deinococcales taxon_class=Deinococci phylum=Deinococcus-Thermus tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
ureE; urease accessory protein UreE
Tax=GWA2_Rokubacteria_73_35_curated
PLM1_100_coex_sep16_scaffold_64_9
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4592..5776
DNA (1185bp) protein (395aa)
Uncharacterized protein Tax=Bradyrhizobium sp. STM 3843 RepID=H0TTN0_9BRAD
putative nonspecific lipid-transfer protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
PLM1_100_coex_sep16_scaffold_64_10
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5773..6219
DNA (447bp) protein (149aa)
Putative uncharacterized protein Tax=Burkholderia xenovorans (strain LB400) RepID=Q13QL6_BURXL
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
PLM1_100_coex_sep16_scaffold_64_11
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6216..7424
DNA (1209bp) protein (403aa)
Putative uncharacterized protein Tax=Burkholderia xenovorans (strain LB400) RepID=Q143V2_BURXL
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
PLM1_100_coex_sep16_scaffold_64_12
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

7421..8251
DNA (831bp) protein (277aa)
Transcriptional regulator, IclR family Tax=Burkholderia xenovorans (strain LB400) RepID=Q13IG2_BURXL
bacterial transcriptional regulator family protein
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
PLM1_100_coex_sep16_scaffold_64_13
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8248..9399
DNA (1152bp) protein (384aa)
hypothetical protein Tax=SAR202 cluster bacterium SCGC AAA240-N13 RepID=UPI00036E33EE
Uncharacterized protein {ECO:0000313|EMBL:ETW94750.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
luciferase
PLM1_100_coex_sep16_scaffold_64_14
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(9451..11601)
DNA (2151bp) protein (717aa)
Catalase {ECO:0000256|RuleBase:RU000498}; EC=1.11.1.6 {ECO:0000256|RuleBase:RU000498};; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
hypothetical protein Tax=Segetibacter koreensis RepID=UPI00037FC7A1
catalase
PLM1_100_coex_sep16_scaffold_64_15
Cystobacter fuscus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11708..14017)
DNA (2310bp) protein (770aa)
PAS/PAC sensor hybrid histidine kinase (EC:2.7.13.3)
Two-component hybrid sensor and regulator Tax=Cystobacter fuscus DSM 2262 RepID=S9PBR4_9DELT
Two-component hybrid sensor and regulator {ECO:0000313|EMBL:EPX59712.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" source="Cystobacter fuscus DSM 2262.;"
PLM1_100_coex_sep16_scaffold_64_16
bacterium YEK0313, Bacteria

Not on your lists

comp(14163..15125)
DNA (963bp) protein (321aa)
Putative amino-acid metabolite efflux pump Tax=Herminiimonas arsenicoxydans RepID=A4G2H7_HERAR
Putative amino-acid metabolite efflux pump {ECO:0000313|EMBL:CEJ15625.1}; species="Bacteria.;" source="bacterium YEK0313.;"
amino acid metabolite efflux pump
PLM1_100_coex_sep16_scaffold_64_17
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15150..16529
DNA (1380bp) protein (460aa)
hypothetical protein Tax=SAR202 cluster bacterium SCGC AAA240-N13 RepID=UPI0003647037
Uncharacterized protein {ECO:0000313|EMBL:ETW95673.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
putative hydrolase
PLM1_100_coex_sep16_scaffold_64_18
Hymenobacter swuensis, Hymenobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

16547..17002
DNA (456bp) protein (152aa)
membrane protein Tax=Gemmata obscuriglobus RepID=UPI00016C4926
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHJ97218.1}; species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Hymenobacter.;" source="Hymenobacter swuensis DY53.;"
PLM1_100_coex_sep16_scaffold_64_19
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

17189..17563
DNA (375bp) protein (125aa)
Histidine kinase bin=GWC2_Methylomirabilis_70_24 species=Aromatoleum aromaticum genus=Aromatoleum taxon_order=Rhodocyclales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
histidine kinase
Tax=GWA2_Rokubacteria_70_23_curated
PLM1_100_coex_sep16_scaffold_64_20
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

17577..18257
DNA (681bp) protein (227aa)
Putative uncharacterized protein bin=GWC2_Deltaproteobacteria_66_88 species=uncultured Desulfobacterium sp. genus=Desulfobacterium taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Deltaproteobacteria_66_88 organism_group=Deltaproteobacteria
multi-sensor hybrid histidine kinase
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
PLM1_100_coex_sep16_scaffold_64_21
RBG_16_Deltaproteobacteria_48_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18359..19945
DNA (1587bp) protein (529aa)
Glutathione ABC transport system substrate binding protein GsiB bin=GWA2_Methylomirabilis_73_35 species=Cupriavidus necator genus=Cupriavidus taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
family 5 extracellular solute-binding protein
Tax=RBG_16_Deltaproteobacteria_48_10_curated
PLM1_100_coex_sep16_scaffold_64_22
RBG_13_Chloroflexi_51_52_curated, Chloroflexi, Bacteria

Not on your lists

19961..20881
DNA (921bp) protein (307aa)
glutathione ABC transporter permease Tax=Cupriavidus sp. UYPR2.512 RepID=UPI00035EC3E7
gsiC4; glutathione ABC transporter permease GsiC
Tax=RBG_13_Chloroflexi_51_52_curated
PLM1_100_coex_sep16_scaffold_64_23
R_Betaproteobacteria_64_14, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20871..21761
DNA (891bp) protein (297aa)
ABC transporter permease Tax=Ralstonia sp. GA3-3 RepID=R7XA39_9RALS
dppC4; dipeptide transport system permease DppC
Tax=RIFCSPLOWO2_02_Betaproteobacteria_64_14_curated
PLM1_100_coex_sep16_scaffold_64_24
RBG_13_Chloroflexi_51_36_curated, Chloroflexi, Bacteria

Not on your lists

21776..22747
DNA (972bp) protein (324aa)
Oligopeptide ABC transporter ATP-binding protein bin=GWA2_Methylomirabilis_73_35 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
dppD2; dipeptide transport system ATP-binding protein DppD
Tax=RBG_13_Chloroflexi_51_36_curated
PLM1_100_coex_sep16_scaffold_64_25
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22747..23709
DNA (963bp) protein (321aa)
Oligopeptide/dipeptide ABC transporter, ATP-binding protein Tax=Bradyrhizobium sp. YR681 RepID=J3I0G5_9BRAD
peptide ABC transporter substrate-binding protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
PLM1_100_coex_sep16_scaffold_64_26
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(23945..24775)
DNA (831bp) protein (277aa)
Putative membrane protein Tax=Leptolyngbya sp. PCC 7375 RepID=K9F0L4_9CYAN
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
PLM1_100_coex_sep16_scaffold_64_27
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

24967..25980
DNA (1014bp) protein (338aa)
luciferase-like protein bin=bin7_NC10_sister species=Sciscionella marina genus=Sciscionella taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin7_NC10_sister organism_group=NC10
luciferase-like protein
Tax=CSP1_6_Rokubacteria
PLM1_100_coex_sep16_scaffold_64_28
unknown

Not on your lists

26086..26835
DNA (750bp) protein (250aa)

This feature has no annotations

PLM1_100_coex_sep16_scaffold_64_29
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26879..27616)
DNA (738bp) protein (246aa)
Exonuclease III Tax=Mycobacterium sp. (strain Spyr1) RepID=E6TGL7_MYCSR
Uncharacterized protein {ECO:0000313|EMBL:ETW99651.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
exonuclease III
PLM1_100_coex_sep16_scaffold_64_30
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(27629..29251)
DNA (1623bp) protein (541aa)
ABC transporter peptide-binding protein bin=GWF2_Methylomirabilis_70_14 species=unknown genus=Bradyrhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
peptide ABC transporter substrate-binding protein
Tax=GWA2_Rokubacteria_70_23_curated
Displaying items 1-30 of 36 in total

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