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PLM1_100_coex_sep16_scaffold_73

Search features with annotation key words

Displaying items 1-30 of 40 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_100_coex_sep16_scaffold_73_1
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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1..225
DNA (225bp) protein (75aa)
homoserine dehydrogenase ThrA (EC:1.1.1.3)
Homoserine dehydrogenase bin=GWC2_Methylomirabilis_70_24 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
Tax=GWA2_Rokubacteria_70_23_curated
PLM1_100_coex_sep16_scaffold_73_2
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

260..1255
DNA (996bp) protein (332aa)
Putative uncharacterized protein bin=GWC2_Methylomirabilis_70_24 species=Oscillochloris trichoides genus=Oscillochloris taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
hypothetical protein
Tax=GWA2_Rokubacteria_70_23_curated
PLM1_100_coex_sep16_scaffold_73_3
unknown

Not on your lists

comp(1231..1461)
DNA (231bp) protein (77aa)

This feature has no annotations

PLM1_100_coex_sep16_scaffold_73_4
RBG_16_Gamma2_64_11_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1615..2076
DNA (462bp) protein (154aa)
hypothetical protein Magn03010940 bin=GWC2_Methylomirabilis_70_24 species=Magnetospirillum magnetotacticum genus=Magnetospirillum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
hypothetical protein
Tax=RBG_16_Gamma2_64_11_curated
PLM1_100_coex_sep16_scaffold_73_5
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

2214..2792
DNA (579bp) protein (193aa)
RNA polymerase sigma factor bin=GWC2_Methylomirabilis_70_24 species=Pelobacter carbinolicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
RNA polymerase sigma factor
Tax=GWA2_Rokubacteria_70_23_curated
PLM1_100_coex_sep16_scaffold_73_6
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

2789..3289
DNA (501bp) protein (167aa)
Putative transmembrane anti-sigma factor bin=GWC2_Methylomirabilis_70_24 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
Tax=GWA2_Rokubacteria_70_23_curated
PLM1_100_coex_sep16_scaffold_73_7
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

3293..3592
DNA (300bp) protein (100aa)
id=14627624 bin=bin7_NC10_sister tax=bin7_NC10_sister organism_group=NC10
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
PLM1_100_coex_sep16_scaffold_73_8
R_Rokubacteria_69_13, Rokubacteria, Bacteria

Not on your lists

3640..4257
DNA (618bp) protein (206aa)
hypothetical protein bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
Tax=RIFCSPHIGHO2_02_FULL_Rokubacteria_69_13_curated
PLM1_100_coex_sep16_scaffold_73_9
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

4310..5539
DNA (1230bp) protein (410aa)
lysC; aspartokinase (EC:2.7.2.4)
Aspartokinase bin=GWC2_Methylomirabilis_70_24 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
Tax=CSP1_6_Rokubacteria
PLM1_100_coex_sep16_scaffold_73_10
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

5542..6657
DNA (1116bp) protein (372aa)
Alcohol dehydrogenase zinc-binding domain protein bin=GWC2_Methylomirabilis_70_24 species=Kyrpidia tusciae genus=Kyrpidia taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
alcohol dehydrogenase zinc-binding domain-containing protein
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM1_100_coex_sep16_scaffold_73_11
alpha proteobacterium BAL199, Alphaproteobacteria, Proteobacteria, Bacteria

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6654..7490
DNA (837bp) protein (279aa)
Nitroreductase Tax=alpha proteobacterium BAL199 RepID=A8TNA3_9PROT
Nitroreductase {ECO:0000313|EMBL:EDP65568.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium BAL199.;"
nitroreductase
PLM1_100_coex_sep16_scaffold_73_12
unknown

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comp(7515..7844)
DNA (330bp) protein (110aa)

This feature has no annotations

PLM1_100_coex_sep16_scaffold_73_13
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

8004..8471
DNA (468bp) protein (156aa)
Competence protein ComEA helix-hairpin-helix repeat protein bin=GWC2_Methylomirabilis_70_16 species=Rhodothermus marinus genus=Rhodothermus taxon_order=Bacteroidetes Order II. Incertae sedis taxon_class=unknown phylum=Bacteroidetes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
competence protein ComEA-like protein with helix-hairpin-helix repeat region
Tax=GWC2_Rokubacteria_70_16_curated
PLM1_100_coex_sep16_scaffold_73_14
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

8464..10860
DNA (2397bp) protein (799aa)
Putative Metallo-beta-lactamase superfamily bin=GWC2_Methylomirabilis_70_24 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
Metallo-beta-lactamase superfamily
Tax=GWA2_Rokubacteria_70_23_curated
PLM1_100_coex_sep16_scaffold_73_15
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(10902..11900)
DNA (999bp) protein (333aa)
rpoA; DNA-directed RNA polymerase subunit alpha (EC:2.7.7.6)
DNA-directed RNA polymerase subunit alpha bin=GWC2_Methylomirabilis_70_16 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Tax=GWC2_Rokubacteria_70_16_curated
PLM1_100_coex_sep16_scaffold_73_16
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

12034..13089
DNA (1056bp) protein (352aa)
Aminodeoxychorismate lyase bin=GWC2_Methylomirabilis_70_24 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
aminodeoxychorismate lyase
Tax=GWC2_Rokubacteria_70_16_curated
PLM1_100_coex_sep16_scaffold_73_17
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

13354..14097
DNA (744bp) protein (248aa)
Acyltransferase bin=GWC2_Methylomirabilis_70_24 species=unknown genus=Thermus taxon_order=Thermales taxon_class=Deinococci phylum=Deinococcus-Thermus tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
1-acyl-sn-glycerol-3-phosphate acyltransferase
Tax=GWA2_Rokubacteria_70_23_curated
PLM1_100_coex_sep16_scaffold_73_18
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

14094..15503
DNA (1410bp) protein (470aa)
Argininosuccinate lyase bin=GWC2_Methylomirabilis_70_16 species=Symbiobacterium thermophilum genus=Symbiobacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
argininosuccinate lyase
Tax=GWC2_Rokubacteria_70_16_curated
PLM1_100_coex_sep16_scaffold_73_19
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

15500..16579
DNA (1080bp) protein (360aa)
Putative Fibronectin, type III bin=GWC2_Methylomirabilis_70_24 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
hypothetical protein
Tax=GWA2_Rokubacteria_70_23_curated
PLM1_100_coex_sep16_scaffold_73_20
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(16755..18014)
DNA (1260bp) protein (420aa)
Diaminopimelate decarboxylase bin=GWC2_Methylomirabilis_70_24 species=Coraliomargarita akajimensis genus=Coraliomargarita taxon_order=Puniceicoccales taxon_class=Opitutae phylum=Verrucomicrobia tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
diaminopimelate decarboxylase
Tax=GWA2_Rokubacteria_70_23_curated
PLM1_100_coex_sep16_scaffold_73_21
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

18125..19018
DNA (894bp) protein (298aa)
dapA; dihydrodipicolinate synthase (EC:4.2.1.52)
Dihydrodipicolinate synthase bin=GWC2_Methylomirabilis_70_16 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Tax=GWC2_Rokubacteria_70_16_curated
PLM1_100_coex_sep16_scaffold_73_22
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

19032..19835
DNA (804bp) protein (268aa)
dapB; dihydrodipicolinate reductase (EC:1.3.1.26)
Dihydrodipicolinate reductase bin=GWC2_Methylomirabilis_70_24 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
Tax=GWA2_Rokubacteria_70_23_curated
PLM1_100_coex_sep16_scaffold_73_23
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

19832..20605
DNA (774bp) protein (258aa)
2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase bin=GWC2_Methylomirabilis_70_24 species=Desulfomonile tiedjei genus=Desulfomonile taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase
Tax=CSP1_6_Rokubacteria
PLM1_100_coex_sep16_scaffold_73_24
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

20602..21816
DNA (1215bp) protein (405aa)
PLP-dependent aminotransferase, putative aspartate aminotransferase (EC:2.6.1.- 2.6.1.1)
LL-diaminopimelate aminotransferase bin=GWC2_Methylomirabilis_70_24 species=delta proteobacterium NaphS2 genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
Tax=GWA2_Rokubacteria_70_23_curated
PLM1_100_coex_sep16_scaffold_73_25
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

21921..22178
DNA (258bp) protein (86aa)
Dihydroneopterin aldolase bin=GWC2_Methylomirabilis_70_24 species=unknown genus=Brevibacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
dihydroneopterin aldolase
Tax=GWA2_Rokubacteria_70_23_curated
PLM1_100_coex_sep16_scaffold_73_26
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

22186..22734
DNA (549bp) protein (183aa)
folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase (EC:2.7.6.3)
2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase bin=GWC2_Methylomirabilis_70_24 species=Marvinbryantia formatexigens genus=Marvinbryantia taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
Tax=GWA2_Rokubacteria_70_23_curated
PLM1_100_coex_sep16_scaffold_73_27
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

22773..23297
DNA (525bp) protein (175aa)
RNA polymerase sigma factor bin=GWC2_Methylomirabilis_70_24 species=Chlorobium chlorochromatii genus=Chlorobium taxon_order=Chlorobiales taxon_class=Chlorobia phylum=Chlorobi tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
RNA polymerase sigma factor
Tax=GWA2_Rokubacteria_70_23_curated
PLM1_100_coex_sep16_scaffold_73_28
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

23294..24013
DNA (720bp) protein (240aa)
id=4801471 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Tax=GWC2_Rokubacteria_70_16_curated
PLM1_100_coex_sep16_scaffold_73_29
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(24044..25240)
DNA (1197bp) protein (399aa)
O-antigen polymerase bin=GWC2_Methylomirabilis_70_16 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
O-Antigen Polymerase family
Tax=GWC2_Rokubacteria_70_16_curated
PLM1_100_coex_sep16_scaffold_73_30
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

comp(25242..26639)
DNA (1398bp) protein (466aa)
putative undecaprenyl-phosphate glucose phosphotransferase (EC:2.7.8.-)
Putative capsular polysaccharide synthesis protein (CpsA) bin=GWC2_Methylomirabilis_70_24 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
Tax=CSP1_6_Rokubacteria
Displaying items 1-30 of 40 in total

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