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PLM1_100_coex_sep16_scaffold_78

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Displaying items 1-30 of 35 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_100_coex_sep16_scaffold_78_1
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

117..1052
DNA (936bp) protein (312aa)
putative F420-dependent oxidoreductase bin=bin7_NC10_sister species=Actinomadura madurae genus=Actinomadura taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin7_NC10_sister organism_group=NC10
putative F420-dependent oxidoreductase
Tax=CSP1_6_Rokubacteria
PLM1_100_coex_sep16_scaffold_78_2
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

1093..2055
DNA (963bp) protein (321aa)
putative signal peptide peptidase SppA (EC:3.4.21.-)
Putative Signal peptide peptidase SppA bin=GWC2_Methylomirabilis_70_24 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
Tax=GWA2_Rokubacteria_70_23_curated
PLM1_100_coex_sep16_scaffold_78_3
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(2143..4611)
DNA (2469bp) protein (823aa)
PAS/PAC sensor hybrid histidine kinase bin=GWC2_Methylomirabilis_70_16 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
multi-sensor hybrid histidine kinase
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
PLM1_100_coex_sep16_scaffold_78_4
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(4641..7118)
DNA (2478bp) protein (826aa)
sensor histidine kinase protein (EC:2.7.13.3)
Uncharacterized protein bin=GWF2_Methylomirabilis_70_14 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=TA06 tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=GWA2_Rokubacteria_70_23_curated
PLM1_100_coex_sep16_scaffold_78_5
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(7131..7460)
DNA (330bp) protein (110aa)
Two component, sigma54 specific, transcriptional regulator, Fis family bin=GWC2_Methylomirabilis_70_16 species=Desulfobacca acetoxidans genus=Desulfobacca taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
AAA domain family protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
PLM1_100_coex_sep16_scaffold_78_6
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(7693..9084)
DNA (1392bp) protein (464aa)
Two component, sigma54 specific, transcriptional regulator, Fis family bin=GWC2_Methylomirabilis_70_16 species=Desulfobacca acetoxidans genus=Desulfobacca taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Fis family transcriptional regulator
Tax=GWC2_Rokubacteria_70_16_curated
PLM1_100_coex_sep16_scaffold_78_7
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(9089..9943)
DNA (855bp) protein (285aa)
Uncharacterized protein bin=GWC2_Methylomirabilis_70_16 species=Bradyrhizobium sp. STM 3843 genus=Bradyrhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
PLM1_100_coex_sep16_scaffold_78_8
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(9940..10617)
DNA (678bp) protein (226aa)
id=3526414 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Tax=GWC2_Rokubacteria_70_16_curated
PLM1_100_coex_sep16_scaffold_78_9
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(10918..11523)
DNA (606bp) protein (202aa)
Coenzyme A pyrophosphatase bin=GWC2_Methylomirabilis_70_24 species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
DNA mismatch repair protein MutT
Tax=GWA2_Rokubacteria_70_23_curated
PLM1_100_coex_sep16_scaffold_78_10
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(11606..12373)
DNA (768bp) protein (256aa)
4-oxalocrotonate decarboxylase (EC:4.1.1.77)
2-hydroxypent-2,4-dienoate hydratase (Protein belongs to CMGI-2) bin=GWF2_Methylomirabilis_70_14 species=unknown genus=unknown taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=GWA2_Rokubacteria_70_23_curated
PLM1_100_coex_sep16_scaffold_78_11
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(12370..13158)
DNA (789bp) protein (263aa)
sat:SYN_01020 Sir2 family NAD-dependent deacetylase; K12410 NAD-dependent deacetylase [EC:3.5.1.-] bin=RBG2 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=RBG2 organism_group=Chloroflexi
sir2 family protein
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
PLM1_100_coex_sep16_scaffold_78_12
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(13155..13514)
DNA (360bp) protein (120aa)
id=4117858 bin=GWF2_Methylomirabilis_70_14 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
PLM1_100_coex_sep16_scaffold_78_13
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(13577..13711)
DNA (135bp) protein (45aa)
Propanoyl-CoA C-acyltransferase bin=GWF2_Methylomirabilis_70_14 species=Mycobacterium rhodesiae genus=Mycobacterium taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=GWA2_Rokubacteria_70_23_curated
PLM1_100_coex_sep16_scaffold_78_14
RBG_13_Deltaproteobacteria_49_15_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13754..15034)
DNA (1281bp) protein (427aa)
TRAP-type C4-dicarboxylate transport system, large permease component bin=GWC2_Methylomirabilis_70_16 species=unknown genus=Bordetella taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hypothetical protein
Tax=RBG_13_Deltaproteobacteria_49_15_curated
PLM1_100_coex_sep16_scaffold_78_15
RBG_19FT_COMBO_Deltaproteobacteria_52_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15031..15507)
DNA (477bp) protein (159aa)
Putative C4 decarboxylate transport protein Tax=Nocardioidaceae bacterium Broad-1 RepID=E9V084_9ACTO
TRAP dicarboxylate transporter protein DctQ subunit
Tax=RBG_19FT_COMBO_Deltaproteobacteria_52_11_curated
PLM1_100_coex_sep16_scaffold_78_16
RBG_19FT_COMBO_Deltaproteobacteria_52_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15511..16524)
DNA (1014bp) protein (338aa)
TRAP dicarboxylate transporter, DctP subunit Tax=Alkaliphilus metalliredigens (strain QYMF) RepID=A6TTZ1_ALKMQ
TRAP dicarboxylate transporter subunit DctP
Tax=RBG_19FT_COMBO_Deltaproteobacteria_52_11_curated
PLM1_100_coex_sep16_scaffold_78_17
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16727..17266
DNA (540bp) protein (180aa)
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
PLM1_100_coex_sep16_scaffold_78_18
Thermobaculum terrenum, Thermobaculum, Bacteria

Not on your lists

17397..19151
DNA (1755bp) protein (585aa)
hypothetical protein Tax=Pseudanabaena sp. PCC 6802 RepID=UPI00037A4F79
PAS/PAC and GAF sensor-containing diguanylate cyclase/phosphodiesterase
Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) {ECO:0000313|EMBL:ACZ41363.1}; species="Bacteria; Thermobaculum.;" source="Thermobaculum terrenum (strain ATCC BAA-798 / YNP1).;"
PLM1_100_coex_sep16_scaffold_78_19
CSP1_5_NC10, NC10, Bacteria

Not on your lists

19139..22105
DNA (2967bp) protein (989aa)
hypothetical protein bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=Spartobacteria phylum=Verrucomicrobia tax=bin3_NC10 organism_group=NC10
hypothetical protein
Tax=CSP1_5_NC10
PLM1_100_coex_sep16_scaffold_78_20
Nitrococcus mobilis, Nitrococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22118..23293)
DNA (1176bp) protein (392aa)
Probable transporter Tax=Nitrococcus mobilis Nb-231 RepID=A4BRK1_9GAMM
Probable transporter {ECO:0000313|EMBL:EAR21572.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Nitrococcus.;" source="Nitrococcus mobilis Nb-231.;"
chrA; chromate transporter
PLM1_100_coex_sep16_scaffold_78_21
R_NC10_66_22, NC10, Bacteria

Not on your lists

comp(23301..24692)
DNA (1392bp) protein (464aa)
fumC; fumarate hydratase (EC:4.2.1.2)
Fumarate hydratase class II bin=GWF2_Methylomirabilis_70_14 species=Sorangium cellulosum genus=Sorangium taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM1_100_coex_sep16_scaffold_78_22
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24765..25757
DNA (993bp) protein (331aa)
Beta-lactamase-like protein Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IQZ0_KORVE
Uncharacterized protein {ECO:0000313|EMBL:ETW97553.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
beta-lactamase-like protein
PLM1_100_coex_sep16_scaffold_78_23
RBG_16_Chloroflexi_68_14_curated, Chloroflexi, Bacteria

Not on your lists

25765..26967
DNA (1203bp) protein (401aa)
Biotin biosynthesis cytochrome P450 Tax=Nitrolancetus hollandicus Lb RepID=I4EKT4_9CHLR
cytochrome p450
Tax=RBG_16_Chloroflexi_68_14_curated
PLM1_100_coex_sep16_scaffold_78_24
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(27048..27542)
DNA (495bp) protein (165aa)
Putative uncharacterized protein bin=GWA2_Methylomirabilis_73_35 species=Methylobacterium sp. genus=Methylobacterium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
Tax=GWA2_Rokubacteria_73_35_curated
PLM1_100_coex_sep16_scaffold_78_25
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(27604..28215)
DNA (612bp) protein (204aa)
Methyltransferase type 11 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Thioalkalivibrio taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
type 11 methyltransferase
Tax=GWA2_Rokubacteria_73_35_curated
PLM1_100_coex_sep16_scaffold_78_26
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(28223..29092)
DNA (870bp) protein (290aa)
Putative monooxygenase bin=GWF2_Methylomirabilis_70_14 species=Thermomicrobium roseum genus=Thermomicrobium taxon_order=Thermomicrobiales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
putative monooxygenase
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
PLM1_100_coex_sep16_scaffold_78_27
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29102..29683)
DNA (582bp) protein (194aa)
Uncharacterized protein Tax=Sorangium cellulosum So0157-2 RepID=S4XNN1_SORCE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP34174.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
PLM1_100_coex_sep16_scaffold_78_28
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(29668..30117)
DNA (450bp) protein (150aa)
Putative uncharacterized protein bin=GWA2_Methylomirabilis_73_35 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=GWC2_Rokubacteria_70_16_curated
PLM1_100_coex_sep16_scaffold_78_29
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

30229..30990
DNA (762bp) protein (254aa)
enoyl-CoA hydratase (EC:4.2.1.17)
enoyl-CoA hydratase Tax=Amycolatopsis sp. ATCC 39116 RepID=UPI000262757B
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM1_100_coex_sep16_scaffold_78_30
[Clostridium] asparagiforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31020..31733
DNA (714bp) protein (238aa)
4-phosphoerythronate dehydrogenase {ECO:0000313|EMBL:EEG56745.1}; EC=1.1.1.290 {ECO:0000313|EMBL:EEG56745.1};; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium asparagiforme] DSM 15981.;"
4-phosphoerythronate dehydrogenase Tax=Clostridium asparagiforme DSM 15981 RepID=C0CVW6_9CLOT
D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein
Displaying items 1-30 of 35 in total

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