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PLM1_100_coex_sep16_scaffold_79

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Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_100_coex_sep16_scaffold_79_1
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(53..463)
DNA (411bp) protein (137aa)
Uncharacterized conserved protein bin=GWC2_Methylomirabilis_70_24 species=Arthrobacter sp. SJCon genus=Arthrobacter taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
hypothetical protein
Tax=GWA2_Rokubacteria_70_23_curated
PLM1_100_coex_sep16_scaffold_79_2
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

comp(479..2470)
DNA (1992bp) protein (664aa)
hypothetical protein bin=bin7_NC10_sister species=Ktedonobacter racemifer genus=Ktedonobacter taxon_order=Ktedonobacterales taxon_class=Ktedonobacteria phylum=Chloroflexi tax=bin7_NC10_sister organism_group=NC10
protein of unknown function DUF224 cysteine-rich region domain protein
Tax=CSP1_6_Rokubacteria
PLM1_100_coex_sep16_scaffold_79_3
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(2516..3481)
DNA (966bp) protein (322aa)
LAO/AO transport system ATPase bin=GWF2_Methylomirabilis_70_14 species=uncultured marine microorganism HF4000_APKG10K24 genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
argK; Lysine/arginine/ornithine (LAO/AO) transport system ATPase (argK)
Tax=GWA2_Rokubacteria_70_23_curated
PLM1_100_coex_sep16_scaffold_79_4
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(3496..4002)
DNA (507bp) protein (169aa)
Ribosomal-protein-alanine acetyltransferase bin=GWC2_Methylomirabilis_70_16 species=Caldalkalibacillus thermarum genus=Caldalkalibacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
ribosomal-protein-alanine acetyltransferase
Tax=GWC2_Rokubacteria_70_16_curated
PLM1_100_coex_sep16_scaffold_79_5
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists


comp(3995..4678)
DNA (684bp) protein (228aa)
Peptidase M22, glycoprotease bin=GWC2_Methylomirabilis_70_24 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
peptidase
Tax=GWA2_Rokubacteria_70_23_curated
PLM1_100_coex_sep16_scaffold_79_6
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

4747..5427
DNA (681bp) protein (227aa)
Orotate phosphoribosyltransferase (OPRT) (OPRTase) (EC:2.4.2.10)
Putative Orotate phosphoribosyltransferase (OPRT) (OPRTase) bin=GWC2_Methylomirabilis_70_24 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
Tax=GWA2_Rokubacteria_70_23_curated
PLM1_100_coex_sep16_scaffold_79_7
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

5700..6575
DNA (876bp) protein (292aa)
Putative uncharacterized protein bin=GWC2_Methylomirabilis_70_16 species=Desulfovibrio desulfuricans genus=Desulfovibrio taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hypothetical protein
Tax=GWC2_Rokubacteria_70_16_curated
PLM1_100_coex_sep16_scaffold_79_8
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

comp(6646..7152)
DNA (507bp) protein (169aa)
Transcriptional repressor NrdR bin=GWC2_Methylomirabilis_70_24 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
nrdR; transcriptional regulator NrdR
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
PLM1_100_coex_sep16_scaffold_79_9
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(7149..8396)
DNA (1248bp) protein (416aa)
glycine hydroxymethyltransferase (EC:2.1.2.1)
Serine hydroxymethyltransferase bin=GWF2_Methylomirabilis_70_14 species=unknown genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=GWA2_Rokubacteria_70_23_curated
PLM1_100_coex_sep16_scaffold_79_10
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(8393..8857)
DNA (465bp) protein (155aa)
RpiB/LacA/LacB family sugar-phosphate isomerase (EC:5.3.1.6)
Ribose 5-phosphate isomerase B bin=GWF2_Methylomirabilis_70_14 species=unknown genus=Dictyoglomus taxon_order=Dictyoglomales taxon_class=Dictyoglomia phylum=Dictyoglomi tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=GWA2_Rokubacteria_70_23_curated
PLM1_100_coex_sep16_scaffold_79_11
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

Not on your lists

comp(8890..10122)
DNA (1233bp) protein (411aa)
Major facilitator superfamily MFS_1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MFT3_9BACT
Major facilitator superfamily MFS_1
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:CBE68614.1}; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
PLM1_100_coex_sep16_scaffold_79_12
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

comp(10119..11414)
DNA (1296bp) protein (432aa)
acyltransferase domain-containing protein bin=bin7_NC10_sister species=Plesiocystis pacifica genus=Plesiocystis taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
acyltransferase domain-containing protein
Tax=CSP1_6_Rokubacteria
PLM1_100_coex_sep16_scaffold_79_13
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(11498..12880)
DNA (1383bp) protein (461aa)
Beta-lactamase-like protein bin=GWC2_Methylomirabilis_70_24 species=Myxococcus stipitatus genus=Myxococcus taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
hypothetical protein
Tax=GWA2_Rokubacteria_70_23_curated
PLM1_100_coex_sep16_scaffold_79_14
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(12888..14120)
DNA (1233bp) protein (411aa)
Probable tRNA sulfurtransferase bin=GWC2_Methylomirabilis_70_16 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
thiI; thiamine biosynthesis protein thiI
Tax=GWC2_Rokubacteria_70_16_curated
PLM1_100_coex_sep16_scaffold_79_15
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(14276..15100)
DNA (825bp) protein (275aa)
Putative uncharacterized protein bin=GWF2_Methylomirabilis_70_14 species=Desulfuromonas acetoxidans genus=Desulfuromonas taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
Tax=GWC2_Rokubacteria_70_16_curated
PLM1_100_coex_sep16_scaffold_79_16
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(15100..15708)
DNA (609bp) protein (203aa)
Molybdenum cofactor guanylyltransferase bin=GWC2_Methylomirabilis_70_16 species=Desulfomonile tiedjei genus=Desulfomonile taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
molybdopterin-guanine dinucleotide biosynthesis protein A
Tax=GWC2_Rokubacteria_70_16_curated
PLM1_100_coex_sep16_scaffold_79_17
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(15699..16274)
DNA (576bp) protein (192aa)
Putative translation factor bin=GWC2_Methylomirabilis_70_16 species=Symbiobacterium thermophilum genus=Symbiobacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
translation factor SUA5
Tax=GWC2_Rokubacteria_70_16_curated
PLM1_100_coex_sep16_scaffold_79_18
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(16337..17617)
DNA (1281bp) protein (427aa)
phosphoribosylamine--glycine ligase (EC:6.3.4.13)
Phosphoribosylamine--glycine ligase bin=GWC2_Methylomirabilis_70_16 species=Desulfarculus baarsii genus=Desulfarculus taxon_order=Desulfarculales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Tax=GWC2_Rokubacteria_70_16_curated
PLM1_100_coex_sep16_scaffold_79_19
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(17614..18483)
DNA (870bp) protein (290aa)
Tetratricopeptide TPR_2 repeat protein bin=GWC2_Methylomirabilis_70_16 species=Candidatus Solibacter usitatus genus=Candidatus Solibacter taxon_order=Solibacterales taxon_class=Solibacteres phylum=Acidobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hypothetical protein
Tax=GWC2_Rokubacteria_70_16_curated
PLM1_100_coex_sep16_scaffold_79_20
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(18521..20131)
DNA (1611bp) protein (537aa)
Bifunctional purine biosynthesis protein PurH bin=GWF2_Methylomirabilis_70_14 species=unknown genus=Magnetococcus taxon_order=Magnetococcales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase
Tax=GWA2_Rokubacteria_70_23_curated
PLM1_100_coex_sep16_scaffold_79_21
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(20128..20748)
DNA (621bp) protein (207aa)
phosphoribosylglycinamide formyltransferase (EC:2.1.2.2)
Phosphoribosylglycinamide formyltransferase, folate-dependent bin=GWC2_Methylomirabilis_70_16 species=Pelobacter carbinolicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Tax=GWC2_Rokubacteria_70_16_curated
PLM1_100_coex_sep16_scaffold_79_22
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(20741..21769)
DNA (1029bp) protein (343aa)
Phosphoribosylformylglycinamidine cyclo-ligase bin=GWC2_Methylomirabilis_70_24 species=Pelotomaculum thermopropionicum genus=Pelotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
PurM; phosphoribosylaminoimidazole synthetase
Tax=GWA2_Rokubacteria_70_23_curated
PLM1_100_coex_sep16_scaffold_79_23
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(21775..23208)
DNA (1434bp) protein (478aa)
purF; amidophosphoribosyltransferase (EC:2.4.2.14)
Amidophosphoribosyltransferase bin=GWC2_Methylomirabilis_70_24 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
Tax=GWA2_Rokubacteria_70_23_curated
PLM1_100_coex_sep16_scaffold_79_24
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(23189..25426)
DNA (2238bp) protein (746aa)
phosphoribosylformylglycinamidine synthase II (EC:6.3.5.3)
Phosphoribosylformylglycinamidine synthase 2 bin=GWC2_Methylomirabilis_70_16 species=uncultured Acidobacteria bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Tax=GWC2_Rokubacteria_70_16_curated
PLM1_100_coex_sep16_scaffold_79_25
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(25454..26167)
DNA (714bp) protein (238aa)
Phosphoribosylformylglycinamidine synthase 1 bin=GWC2_Methylomirabilis_70_16 species=Moorella thermoacetica genus=Moorella taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
phosphoribosylformylglycinamidine synthase I
Tax=GWC2_Rokubacteria_70_16_curated
PLM1_100_coex_sep16_scaffold_79_26
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(26386..26637)
DNA (252bp) protein (84aa)
Phosphoribosylformylglycinamidine synthase protein bin=GWC2_Methylomirabilis_70_24 species=Tistrella mobilis genus=Tistrella taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
phosphoribosylformylglycinamidine synthetase PurS
Tax=GWA2_Rokubacteria_70_23_curated
PLM1_100_coex_sep16_scaffold_79_27
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(26651..27919)
DNA (1269bp) protein (423aa)
Adenylosuccinate lyase bin=GWF2_Methylomirabilis_70_14 species=uncultured Acidobacteria bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
adenylosuccinate lyase
Tax=GWC2_Rokubacteria_70_16_curated
PLM1_100_coex_sep16_scaffold_79_28
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(27957..29216)
DNA (1260bp) protein (420aa)
Putative enzyme bin=GWC2_Methylomirabilis_70_16 species=uncultured bacterium 98 genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
ymxG; hypothetical protein
Tax=GWC2_Rokubacteria_70_16_curated
PLM1_100_coex_sep16_scaffold_79_29
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(29216..31060)
DNA (1845bp) protein (615aa)
pnp; polyribonucleotide nucleotidyltransferase (EC:2.7.7.8)
Polyribonucleotide nucleotidyltransferase bin=GWC2_Methylomirabilis_70_16 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Tax=GWC2_Rokubacteria_70_16_curated
Displaying 29 items

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