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PLM1_100_coex_sep16_scaffold_102

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Displaying items 1-30 of 55 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_100_coex_sep16_scaffold_102_1
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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comp(1..393)
DNA (393bp) protein (131aa)
Diacylglycerol kinase, catalytic region bin=GWA2_Methylomirabilis_73_35 species=uncultured prokaryote genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
TIGR00147: lipid kinase, YegS/Rv2252/BmrU family
Tax=GWA2_Rokubacteria_73_35_curated
PLM1_100_coex_sep16_scaffold_102_2
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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comp(582..1259)
DNA (678bp) protein (226aa)
Beta-lactamase-like bin=GWF2_Methylomirabilis_70_14 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Beta-lactamase-like
Tax=GWA2_Rokubacteria_70_23_curated
PLM1_100_coex_sep16_scaffold_102_3
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(1259..1648)
DNA (390bp) protein (130aa)
id=4830676 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Tax=GWC2_Rokubacteria_70_16_curated
PLM1_100_coex_sep16_scaffold_102_4
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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comp(1714..3489)
DNA (1776bp) protein (592aa)
Putative uncharacterized protein bin=GWC2_Methylomirabilis_70_24 species=Candidatus Solibacter usitatus genus=Candidatus Solibacter taxon_order=Solibacterales taxon_class=Solibacteres phylum=Acidobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
hypothetical protein
Tax=GWA2_Rokubacteria_70_23_curated
PLM1_100_coex_sep16_scaffold_102_5
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(3493..5070)
DNA (1578bp) protein (526aa)
Putative ABC-type uncharacterized transport system involved in gliding motility auxiliary component-like bin=GWC2_Methylomirabilis_70_16 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
gliding motility ABC transporter auxillary protein
Tax=GWC2_Rokubacteria_70_16_curated
PLM1_100_coex_sep16_scaffold_102_6
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(5075..5842)
DNA (768bp) protein (256aa)
ABC-type transport system involved in multi-copper enzyme maturation, permease component bin=GWF2_Methylomirabilis_70_14 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
multi-copper enzyme maturation ABC transporter permease
Tax=GWA2_Rokubacteria_70_23_curated
PLM1_100_coex_sep16_scaffold_102_7
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(5842..6816)
DNA (975bp) protein (325aa)
ABC transporter related bin=GWC2_Methylomirabilis_70_16 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
ABC transporter
Tax=GWC2_Rokubacteria_70_16_curated
PLM1_100_coex_sep16_scaffold_102_8
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(6865..8541)
DNA (1677bp) protein (559aa)
Formate--tetrahydrofolate ligase (EC:6.3.4.3)
Formate--tetrahydrofolate ligase bin=GWC2_Methylomirabilis_70_16 species=Thermosinus carboxydivorans genus=Thermosinus taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Tax=GWC2_Rokubacteria_70_16_curated
PLM1_100_coex_sep16_scaffold_102_9
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(8507..8929)
DNA (423bp) protein (141aa)
putative thioesterase (EC:3.1.2.28)
Putative uncharacterized protein bin=GWC2_Methylomirabilis_70_16 species=Candidatus Kuenenia stuttgartiensis genus=Candidatus Kuenenia taxon_order=Candidatus Brocadiales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Tax=GWA2_Rokubacteria_70_23_curated
PLM1_100_coex_sep16_scaffold_102_10
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(9103..9846)
DNA (744bp) protein (248aa)
Uncharacterized protein Tax=Candidatus Methylomirabilis oxyfera RepID=D5MEQ0_9BACT
hypothetical protein
Tax=RBG_16_Deltaproteobacteria_47_11_curated
PLM1_100_coex_sep16_scaffold_102_11
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(9879..10868)
DNA (990bp) protein (330aa)
proteasome-activating nucleotidase (EC:3.6.4.3)
Proteasome-activating nucleotidase bin=GWF2_Methylomirabilis_70_14 species=Thermosphaera aggregans genus=Thermosphaera taxon_order=Desulfurococcales taxon_class=Thermoprotei phylum=Crenarchaeota tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=GWA2_Rokubacteria_70_23_curated
PLM1_100_coex_sep16_scaffold_102_12
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(10873..11406)
DNA (534bp) protein (178aa)
Putative uncharacterized protein bin=GWF2_Methylomirabilis_70_14 species=Aquifex aeolicus genus=Aquifex taxon_order=Aquificales taxon_class=Aquificae phylum=Aquificae tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
Tax=GWA2_Rokubacteria_70_23_curated
PLM1_100_coex_sep16_scaffold_102_13
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(11486..12652)
DNA (1167bp) protein (389aa)
Putative transport protein, belonging to the Major Facilitator Superfamily, of which narK is a member bin=GWF2_Methylomirabilis_70_14 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
transport protein, belonging to the Major Facilitator Superfamily, of which narK is a member
Tax=GWA2_Rokubacteria_70_23_curated
PLM1_100_coex_sep16_scaffold_102_14
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

12749..13660
DNA (912bp) protein (304aa)
id=4830687 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Tax=GWA2_Rokubacteria_70_23_curated
PLM1_100_coex_sep16_scaffold_102_15

Not on your lists

comp(13670..15307)
DNA (1638bp) protein (546aa)
ATP synthase beta chain, putative Tax=Eimeria mitis RepID=U6K7D4_9EIME
Uncharacterized protein {ECO:0000313|EMBL:KKL66431.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
DNA-directed RNA polymerase subunit sigma
PLM1_100_coex_sep16_scaffold_102_16
Acidovorax sp. CF316, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15557..16420
DNA (864bp) protein (288aa)
Penicillin-binding protein, beta-lactamase class C Tax=Acidovorax sp. CF316 RepID=J0KBZ5_9BURK
Penicillin-binding protein, beta-lactamase class C {ECO:0000313|EMBL:EJE48638.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. CF316.;"
beta-lactamase
PLM1_100_coex_sep16_scaffold_102_17
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(16417..17529)
DNA (1113bp) protein (371aa)
Putative RNA polymerase sigma factor bin=GWA2_Methylomirabilis_73_35 species=Bordetella petrii genus=Bordetella taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
ECF subfamily RNA polymerase sigma-24 subunit
Tax=GWA2_Rokubacteria_73_35_curated
PLM1_100_coex_sep16_scaffold_102_18
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(17612..17956)
DNA (345bp) protein (115aa)
hypothetical protein CJLT1_11578 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Mesorhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
Tax=GWA2_Rokubacteria_73_35_curated
PLM1_100_coex_sep16_scaffold_102_19
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(18045..18890)
DNA (846bp) protein (282aa)
PHP domain protein bin=GWF2_Methylomirabilis_70_14 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
PHP domain-containing protein
Tax=GWA2_Rokubacteria_70_23_curated
PLM1_100_coex_sep16_scaffold_102_20
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(18898..20403)
DNA (1506bp) protein (502aa)
leucyl aminopeptidase (EC:3.4.11.1)
Probable cytosol aminopeptidase bin=GWC2_Methylomirabilis_70_16 species=ACD20 genus=ACD20 taxon_order=ACD20 taxon_class=ACD20 phylum=Melainabacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Tax=GWC2_Rokubacteria_70_16_curated
PLM1_100_coex_sep16_scaffold_102_21
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(20409..20882)
DNA (474bp) protein (158aa)
Hydrolase, NUDIX family bin=GWC2_Methylomirabilis_70_16 species=Acidobacterium capsulatum genus=Acidobacterium taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
NUDIX hydrolase
Tax=GWC2_Rokubacteria_70_16_curated
PLM1_100_coex_sep16_scaffold_102_22
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(20892..21815)
DNA (924bp) protein (308aa)
Octanoyltransferase LipM bin=GWC2_Methylomirabilis_70_16 species=Symbiobacterium thermophilum genus=Symbiobacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
lipoate protein ligase
Tax=GWA2_Rokubacteria_70_23_curated
PLM1_100_coex_sep16_scaffold_102_23
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(21874..23343)
DNA (1470bp) protein (490aa)
glycine dehydrogenase subunit 2 (EC:1.4.4.2)
Probable glycine dehydrogenase [decarboxylating] subunit 2 bin=GWC2_Methylomirabilis_70_24 species=unknown genus=unknown taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
Tax=GWA2_Rokubacteria_70_23_curated
PLM1_100_coex_sep16_scaffold_102_24
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

comp(23351..24694)
DNA (1344bp) protein (448aa)
protein GcvPA; K00282 glycine dehydrogenase subunit 1 [EC:1.4.4.2] bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
glycine dehydrogenase
Tax=CSP1_6_Rokubacteria
PLM1_100_coex_sep16_scaffold_102_25
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(24827..25219)
DNA (393bp) protein (131aa)
Glycine cleavage system H protein bin=GWC2_Methylomirabilis_70_24 species=Caldithrix abyssi genus=Caldithrix taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
glycine cleavage system H protein
Tax=GWA2_Rokubacteria_70_23_curated
PLM1_100_coex_sep16_scaffold_102_26
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(25231..26598)
DNA (1368bp) protein (456aa)
gcvT; glycine cleavage system T-protein (aminomethyltransferase) (EC:2.1.2.10)
Aminomethyltransferase bin=GWC2_Methylomirabilis_70_24 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
Tax=GWA2_Rokubacteria_70_23_curated
PLM1_100_coex_sep16_scaffold_102_27
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(26598..27368)
DNA (771bp) protein (257aa)
Lactam utilization-like protein (lamB); K07160 UPF0271 protein bin=bin7_NC10_sister species=Alicyclobacillus pohliae genus=Alicyclobacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=bin7_NC10_sister organism_group=NC10
Lactam utilization protein LamB
Tax=GWA2_Rokubacteria_70_23_curated
PLM1_100_coex_sep16_scaffold_102_28
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(27381..28739)
DNA (1359bp) protein (453aa)
class III aminotransferase; K01845 glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8] bin=bin7_NC10_sister species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=bin7_NC10_sister organism_group=NC10
class III aminotransferase
Tax=GWA2_Rokubacteria_70_23_curated
PLM1_100_coex_sep16_scaffold_102_29
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(28764..29693)
DNA (930bp) protein (310aa)
Allophanate hydrolase subunit 2 bin=GWF2_Methylomirabilis_70_14 species=Clostridium sp. MSTE9 genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Dur1; allophanate hydrolase subunit 2
Tax=GWA2_Rokubacteria_73_35_curated
PLM1_100_coex_sep16_scaffold_102_30
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(29693..30436)
DNA (744bp) protein (248aa)
TIGR00370 family protein bin=GWF2_Methylomirabilis_70_14 species=Thermaerobacter subterraneus genus=Thermaerobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
putative regulatory protein
Tax=GWA2_Rokubacteria_73_35_curated
Displaying items 1-30 of 55 in total

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