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PLM1_100_coex_sep16_scaffold_215

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_100_coex_sep16_scaffold_215_1
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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1..1218
DNA (1218bp) protein (406aa)
nucleotide sugar dehydrogenase (EC:1.1.1.22)
Nucleotide sugar dehydrogenase bin=GWC2_Methylomirabilis_70_16 species=Desulfarculus baarsii genus=Desulfarculus taxon_order=Desulfarculales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Tax=GWC2_Rokubacteria_70_16_curated
PLM1_100_coex_sep16_scaffold_215_2
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

1230..2165
DNA (936bp) protein (312aa)
NAD-dependent epimerase/dehydratase bin=GWC2_Methylomirabilis_70_16 species=Rhodothermus marinus genus=Rhodothermus taxon_order=Bacteroidetes Order II. Incertae sedis taxon_class=unknown phylum=Bacteroidetes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
NAD-dependent epimerase/dehydratase family protein
Tax=GWC2_Rokubacteria_70_16_curated
PLM1_100_coex_sep16_scaffold_215_3
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

2162..3091
DNA (930bp) protein (310aa)
galE; UDP-glucose 4-epimerase (EC:5.1.3.2)
UDP-glucose 4-epimerase bin=GWF2_Methylomirabilis_70_14 species=Stigmatella aurantiaca genus=Stigmatella taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=GWC2_Rokubacteria_70_16_curated
PLM1_100_coex_sep16_scaffold_215_4
R_Rokubacteria_69_13, Rokubacteria, Bacteria

Not on your lists

3088..3261
DNA (174bp) protein (58aa)
hypothetical protein; K09791 hypothetical protein bin=bin7_NC10_sister species=Thermomicrobium roseum genus=Thermomicrobium taxon_order=Thermomicrobiales taxon_class=Thermomicrobia phylum=Chloroflexi tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
Tax=RIFCSPHIGHO2_02_FULL_Rokubacteria_69_13_curated
PLM1_100_coex_sep16_scaffold_215_5
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

3402..4379
DNA (978bp) protein (326aa)
Nucleotidyl transferase bin=GWC2_Methylomirabilis_70_24 species=Conexibacter woesei genus=Conexibacter taxon_order=Solirubrobacterales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
nucleotidyl transferase
Tax=GWA2_Rokubacteria_70_23_curated
PLM1_100_coex_sep16_scaffold_215_6
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

4500..6290
DNA (1791bp) protein (597aa)
Elongation factor 4 bin=GWC2_Methylomirabilis_70_16 species=Alicyclobacillus acidocaldarius genus=Alicyclobacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
lepA; GTP-binding protein LepA
Tax=GWC2_Rokubacteria_70_16_curated
PLM1_100_coex_sep16_scaffold_215_7
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

6301..6984
DNA (684bp) protein (228aa)
signal peptidase I (EC:3.4.21.89)
Signal peptidase I bin=GWC2_Methylomirabilis_70_16 species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Tax=GWC2_Rokubacteria_70_16_curated
PLM1_100_coex_sep16_scaffold_215_8
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

7098..8003
DNA (906bp) protein (302aa)
Coproporphyrinogen III oxidase bin=GWC2_Methylomirabilis_70_16 species=Corynebacterium genitalium genus=Corynebacterium taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
coproporphyrinogen III oxidase
Tax=GWC2_Rokubacteria_70_16_curated
PLM1_100_coex_sep16_scaffold_215_9
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

8018..9064
DNA (1047bp) protein (349aa)
Heat-inducible transcription repressor hrcA bin=GWC2_Methylomirabilis_70_16 species=Pelobacter propionicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hrcA; heat-inducible transcription repressor HrcA
Tax=GWC2_Rokubacteria_70_16_curated
PLM1_100_coex_sep16_scaffold_215_10
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

9284..9829
DNA (546bp) protein (182aa)
Protein GrpE bin=GWC2_Methylomirabilis_70_16 species=Pelobacter propionicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
grpE; protein GrpE
Tax=GWC2_Rokubacteria_70_16_curated
PLM1_100_coex_sep16_scaffold_215_11
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

9831..10925
DNA (1095bp) protein (365aa)
Chaperone protein DnaJ bin=GWC2_Methylomirabilis_70_16 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
molecular chaperone DnaJ
Tax=GWC2_Rokubacteria_70_16_curated
PLM1_100_coex_sep16_scaffold_215_12
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

10925..11809
DNA (885bp) protein (295aa)
Ribosomal protein L11 methyltransferase bin=GWC2_Methylomirabilis_70_16 species=Alicyclobacillus hesperidum genus=Alicyclobacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
50S ribosomal protein L11 methyltransferase
Tax=GWC2_Rokubacteria_70_16_curated
PLM1_100_coex_sep16_scaffold_215_13
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

11806..12549
DNA (744bp) protein (248aa)
Ribosomal RNA small subunit methyltransferase E bin=GWC2_Methylomirabilis_70_24 species=Alkalilimnicola ehrlichii genus=Alkalilimnicola taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
Ribosomal RNA small subunit methyltransferase E
Tax=GWA2_Rokubacteria_70_23_curated
PLM1_100_coex_sep16_scaffold_215_14
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

12551..12955
DNA (405bp) protein (135aa)
hypothetical protein bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
PLM1_100_coex_sep16_scaffold_215_15
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

13103..14032
DNA (930bp) protein (310aa)
UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase bin=GWC2_Methylomirabilis_70_24 species=uncultured Acidobacteria bacterium HF0770_27F21 genus=unknown taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase
Tax=GWA2_Rokubacteria_70_23_curated
PLM1_100_coex_sep16_scaffold_215_16
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

14133..14720
DNA (588bp) protein (196aa)
Uncharacterized protein bin=GWC2_Methylomirabilis_70_16 species=Nitrospina gracilis genus=Nitrospina taxon_order=Nitrospinales taxon_class=Nitrospinia phylum=Nitrospinae tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Tax=GWC2_Rokubacteria_70_16_curated
PLM1_100_coex_sep16_scaffold_215_17
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

14720..16963
DNA (2244bp) protein (748aa)
Sensor histidine kinase, HAMP and PAS domain-containing bin=GWC2_Methylomirabilis_70_16 species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
sensor histidine kinase, HAMP and PAS domain-containing
Tax=GWC2_Rokubacteria_70_16_curated
PLM1_100_coex_sep16_scaffold_215_18
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

16972..18336
DNA (1365bp) protein (455aa)
Two component, sigma54 specific, transcriptional regulator, Fis family bin=GWF2_Methylomirabilis_70_14 species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Fis family transcriptional regulator
Tax=GWA2_Rokubacteria_70_23_curated
PLM1_100_coex_sep16_scaffold_215_19
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

18386..19573
DNA (1188bp) protein (396aa)
Amidohydrolase bin=GWC2_Methylomirabilis_70_16 species=Enterococcus faecalis genus=Enterococcus taxon_order=Lactobacillales taxon_class=Bacilli phylum=Firmicutes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
N-acyl-D-amino acid deacylase
Tax=GWC2_Rokubacteria_70_16_curated
PLM1_100_coex_sep16_scaffold_215_20
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

19638..23009
DNA (3372bp) protein (1124aa)
Adenylyl cyclase class-3/4/guanylyl cyclase:Tetratricopeptide TPR_4 bin=GWC2_Methylomirabilis_70_16 species=Cupriavidus necator genus=Cupriavidus taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
ATP synthase subunit beta
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM1_100_coex_sep16_scaffold_215_21
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

23099..23725
DNA (627bp) protein (209aa)
hypothetical protein bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM1_100_coex_sep16_scaffold_215_22
Dactylellina haptotyla, Dactylellina, Orbiliales, Orbiliomycetes, Ascomycota, Fungi

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23818..25869
DNA (2052bp) protein (684aa)
Uncharacterized protein Tax=Dactylellina haptotyla (strain CBS 200.50) RepID=S8BE21_DACHA
Uncharacterized protein {ECO:0000313|EMBL:EPS37498.1}; species="Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Orbiliomycetes; Orbiliales; Orbiliaceae; mitosporic Orbiliaceae; Dactylellina.;" source="Dactylellina haptotyla (strain CBS 200.50) (Nematode-trapping fungus); (Monacrosporium haptotylum).;"
fungalysin metallopeptidase family protein
PLM1_100_coex_sep16_scaffold_215_23
Bradyrhizobium diazoefficiens, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25869..27137
DNA (1269bp) protein (423aa)
putative integral membrane protein (EC:4.6.1.1)
adenylate cyclase 3 Tax=Ruegeria conchae RepID=UPI0002379957
Putative adenylate cyclase 3 {ECO:0000313|EMBL:BAR55011.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium diazoefficiens.;"
Displaying 23 items

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