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PLM1_100_coex_sep16_scaffold_293

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Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_100_coex_sep16_scaffold_293_1
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(221..1450)
DNA (1230bp) protein (410aa)
6-phosphofructokinase (EC:2.7.1.11)
6-phosphofructokinase bin=GWC2_Methylomirabilis_70_16 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Tax=GWC2_Rokubacteria_70_16_curated
PLM1_100_coex_sep16_scaffold_293_2
unknown

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1595..1885
DNA (291bp) protein (97aa)

This feature has no annotations

PLM1_100_coex_sep16_scaffold_293_trna_3
unknown

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comp(1872..1945)
DNA (74bp)
transferRNA Arg
PLM1_100_coex_sep16_scaffold_293_3
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2449..3276
DNA (828bp) protein (276aa)
Type 11 methyltransferase Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WAC4_9GAMM
SAM-dependent methyltransferase {ECO:0000313|EMBL:ETX07728.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
methylase involved in ubiquinone/menaquinone biosynthesis
PLM1_100_coex_sep16_scaffold_293_4
unknown

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comp(3281..3658)
DNA (378bp) protein (126aa)

This feature has no annotations

PLM1_100_coex_sep16_scaffold_293_5
unknown

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comp(3667..3882)
DNA (216bp) protein (72aa)

This feature has no annotations

PLM1_100_coex_sep16_scaffold_293_6
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(3879..4829)
DNA (951bp) protein (317aa)
RNA polymerase sigma factor bin=GWC2_Methylomirabilis_70_24 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
RpoD subfamily RNA polymerase sigma-70 subunit
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM1_100_coex_sep16_scaffold_293_7
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(4838..5755)
DNA (918bp) protein (306aa)
Peptidase M23 bin=GWC2_Methylomirabilis_70_24 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
cell wall endopeptidase
Tax=GWA2_Rokubacteria_70_23_curated
PLM1_100_coex_sep16_scaffold_293_8
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(5752..6057)
DNA (306bp) protein (102aa)
Acylphosphatase bin=GWC2_Methylomirabilis_70_16 species=Methanohalophilus mahii genus=Methanohalophilus taxon_order=Methanosarcinales taxon_class=Methanomicrobia phylum=Euryarchaeota tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
acylphosphatase
Tax=GWC2_Rokubacteria_70_16_curated
PLM1_100_coex_sep16_scaffold_293_trna_2
unknown

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comp(6092..6165)
DNA (74bp)
transferRNA Pro
PLM1_100_coex_sep16_scaffold_293_9
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(6192..6842)
DNA (651bp) protein (217aa)
Protein-L-isoaspartate O-methyltransferase 1 bin=GWC2_Methylomirabilis_70_24 species=Syntrophobacter fumaroxidans genus=Syntrophobacter taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
protein-L-isoaspartate O-methyltransferase
Tax=GWA2_Rokubacteria_70_23_curated
PLM1_100_coex_sep16_scaffold_293_10
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(6839..7612)
DNA (774bp) protein (258aa)
5'-nucleotidase SurE bin=GWC2_Methylomirabilis_70_24 species=Leptospirillum ferrodiazotrophum genus=Leptospirillum taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
surE; 5'(3')-nucleotidase/polyphosphatase
Tax=GWA2_Rokubacteria_70_23_curated
PLM1_100_coex_sep16_scaffold_293_trna_1
unknown

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comp(7628..7701)
DNA (74bp)
transferRNA Pro
PLM1_100_coex_sep16_scaffold_293_11
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(7738..8109)
DNA (372bp) protein (124aa)
Regulatory protein MerR bin=GWC2_Methylomirabilis_70_24 species=unknown genus=Acidobacterium taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
regulatory protein MerR
Tax=GWA2_Rokubacteria_70_23_curated
PLM1_100_coex_sep16_scaffold_293_12
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(8128..8409)
DNA (282bp) protein (94aa)
Integration host factor, alpha subunit bin=GWC2_Methylomirabilis_70_16 species=ACD73 genus=ACD73 taxon_order=ACD73 taxon_class=ACD73 phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
integration host factor subunit alpha
Tax=GWC2_Rokubacteria_70_16_curated
PLM1_100_coex_sep16_scaffold_293_13
R_Rokubacteria_69_13, Rokubacteria, Bacteria

Not on your lists

comp(8424..9158)
DNA (735bp) protein (245aa)
Putative uncharacterized protein bin=GWC2_Methylomirabilis_70_16 species=Aureococcus anophagefferens genus=Aureococcus taxon_order=unknown taxon_class=Pelagophyceae phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hypothetical protein
Tax=RIFCSPHIGHO2_02_FULL_Rokubacteria_69_13_curated
PLM1_100_coex_sep16_scaffold_293_14
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(9273..10646)
DNA (1374bp) protein (458aa)
GTPase Der bin=GWC2_Methylomirabilis_70_24 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
engA; GTP-binding protein EngA
Tax=GWA2_Rokubacteria_70_23_curated
PLM1_100_coex_sep16_scaffold_293_15
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(10670..11977)
DNA (1308bp) protein (436aa)
Putative uncharacterized protein bin=GWC2_Methylomirabilis_70_16 species=Candidatus Desulforudis audaxviator genus=Candidatus Desulforudis taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hypothetical protein
Tax=GWC2_Rokubacteria_70_16_curated
PLM1_100_coex_sep16_scaffold_293_16
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(12013..12567)
DNA (555bp) protein (185aa)
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase bin=GWC2_Methylomirabilis_70_16 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase
Tax=GWC2_Rokubacteria_70_16_curated
PLM1_100_coex_sep16_scaffold_293_17
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(12616..13866)
DNA (1251bp) protein (417aa)
GTPase HflX bin=GWF2_Methylomirabilis_70_14 species=Desulfotomaculum kuznetsovii genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
GTP-binding protein HflX
Tax=GWA2_Rokubacteria_70_23_curated
PLM1_100_coex_sep16_scaffold_293_18
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(13863..14813)
DNA (951bp) protein (317aa)
tRNA dimethylallyltransferase 2 bin=GWC2_Methylomirabilis_70_16 species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
tRNA delta(2)-isopentenylpyrophosphate transferase
Tax=GWC2_Rokubacteria_70_16_curated
PLM1_100_coex_sep16_scaffold_293_19
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(14931..15497)
DNA (567bp) protein (189aa)
DNA mismatch repair protein MutL bin=GWC2_Methylomirabilis_70_24 species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
DNA mismatch repair protein MutL
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
Displaying 22 items

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