ggKbase home page

PLM1_100_coex_sep16_scaffold_304

Search features with annotation key words

Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_100_coex_sep16_scaffold_304_1
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(1..234)
DNA (234bp) protein (78aa)
Multi-sensor signal transduction histidine kinase bin=GWC2_Methylomirabilis_70_24 species=Candidatus Desulforudis audaxviator genus=Candidatus Desulforudis taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
Tax=GWA2_Rokubacteria_70_23_curated
PLM1_100_coex_sep16_scaffold_304_2
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(1408..3906)
DNA (2499bp) protein (833aa)
multi-sensor signal transduction histidine kinase bin=bin7_NC10_sister tax=bin7_NC10_sister organism_group=NC10
multi-sensor signal transduction histidine kinase
Tax=GWA2_Rokubacteria_70_23_curated
PLM1_100_coex_sep16_scaffold_304_3
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(3906..4925)
DNA (1020bp) protein (340aa)
fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II (EC:2.3.1.41)
CtcW Tax=Streptomyces aureofaciens RepID=S4S399_STRAU
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
PLM1_100_coex_sep16_scaffold_304_4
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

5041..5844
DNA (804bp) protein (268aa)
id=3949859 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Tax=GWA2_Rokubacteria_70_23_curated
PLM1_100_coex_sep16_scaffold_304_5
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

5841..6821
DNA (981bp) protein (327aa)
2-keto-3-deoxygluconate kinase bin=GWC2_Methylomirabilis_70_16 species=Thermomicrobium roseum genus=Thermomicrobium taxon_order=Thermomicrobiales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
2-keto-3-deoxygluconate kinase
Tax=GWA2_Rokubacteria_70_23_curated
PLM1_100_coex_sep16_scaffold_304_6
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

6831..7706
DNA (876bp) protein (292aa)
Diacylglycerol kinase catalytic domain protein bin=GWC2_Methylomirabilis_70_16 species=uncultured Acidobacteria bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hypothetical protein
Tax=GWC2_Rokubacteria_70_16_curated
PLM1_100_coex_sep16_scaffold_304_7
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

7741..10647
DNA (2907bp) protein (969aa)
Uncharacterized protein bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
Tax=GWA2_Rokubacteria_73_35_curated
PLM1_100_coex_sep16_scaffold_304_8
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

10656..11456
DNA (801bp) protein (267aa)
Alpha/beta hydrolase fold Tax=Candidatus Methylomirabilis oxyfera RepID=D5MM47_9BACT
Alpha/beta hydrolase fold
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
PLM1_100_coex_sep16_scaffold_304_9
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11471..13189
DNA (1719bp) protein (573aa)
Family 3 adenylate cyclase Tax=Microvirga sp. WSM3557 RepID=I4YZ38_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:ETW92716.1}; Flags: Fragment;; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
adenylate/guanylate cyclase
PLM1_100_coex_sep16_scaffold_304_10
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

13194..13985
DNA (792bp) protein (264aa)
Pyridoxamine 5'-phosphate oxidase-related, FMN-binding bin=GWA2_Methylomirabilis_73_35 species=Candidatus Solibacter usitatus genus=Candidatus Solibacter taxon_order=Solibacterales taxon_class=Solibacteres phylum=Acidobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
pyridoxamine 5'-phosphate oxidase-like protein
Tax=GWA2_Rokubacteria_73_35_curated
PLM1_100_coex_sep16_scaffold_304_11
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

14013..14888
DNA (876bp) protein (292aa)
N-carbamoyl-D-amino acid hydrolase (EC:3.5.1.77)
N-carbamyl-D-amino acid amidohydrolase bin=GWC2_Methylomirabilis_70_16 species=unknown genus=Bradyrhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Tax=GWC2_Rokubacteria_70_16_curated
PLM1_100_coex_sep16_scaffold_304_12
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

14888..16315
DNA (1428bp) protein (476aa)
D-Hydantoinase bin=GWC2_Methylomirabilis_70_16 species=unknown genus=Cupriavidus taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
PyrC; dihydroorotase
Tax=GWC2_Rokubacteria_70_16_curated
PLM1_100_coex_sep16_scaffold_304_13
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

16327..17673
DNA (1347bp) protein (449aa)
MmgE/PrpD family protein bin=GWC2_Methylomirabilis_70_24 species=Methylobacterium sp. genus=Methylobacterium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
MmgE/PrpD family protein
Tax=GWA2_Rokubacteria_70_23_curated
PLM1_100_coex_sep16_scaffold_304_14
unknown

Not on your lists

17691..17849
DNA (159bp) protein (53aa)

This feature has no annotations

PLM1_100_coex_sep16_scaffold_304_15
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

17846..19261
DNA (1416bp) protein (472aa)
Amidase bin=GWC2_Methylomirabilis_70_16 species=Rhodopseudomonas palustris genus=Rhodopseudomonas taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
amidase
Tax=GWC2_Rokubacteria_70_16_curated
PLM1_100_coex_sep16_scaffold_304_16
unknown

Not on your lists

comp(19318..19383)
DNA (66bp) protein (22aa)

This feature has no annotations

Displaying 16 items

View Taxonomy